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Name : clpB (XOO1337) Accession : YP_199976.1 Strain : Xanthomonas oryzae KACC10331 Genome accession: NC_006834 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1361587 - 1364283 bp Length : 2697 bp Strand : + Note : - DNA sequence : GTGGTCTATCAACTGCCGATTTCCTCACCGGCAAGCCTTGAAACCGCGCTCGGCAACCGCATCTGCACGGTATCGCCGGC GTTGCCGGCCACCAGTTCAGAGGATTTCCCCATGCGGATGGACAAGCTCACCTCGCGGTTCCAGCAGGCGCTGGCCGACG CGCAGTCGCTGGCTGTGGGCCGCGACCACAACATCATCGAGCCGGTGCACGTGCTGGCCGCGCTGCTCGACCAAAGTGGC GGCAGCATGCGTCCGCTGCTGTCGCAGGCCGGCGTCAACGTGCCGTTGCTACGCGAACGGCTGGGCGAGGCGCTGGACAC GTTGCCCAAGGTGTCCGGGCAGGAAGGCAATCTGTCGATCGGCAACGACCTCAACCGCCTGCTCAACCAGACCGACAAGC TCGCCCAGCAACATGGCGATGCGTTCATCGCCAGCGAATGGTTCGTGCTGGCCGCCGCCGACGATGCCAGCCCGCTGGGC GTGGCGTTGCGCGCGGCCGGTGGCGACAAGAAGAAGATCGAGGCGGCCATCGACAAGCTGCGTGGCGGCGAAACAGTGCA ATCGGAAAATGCCGAAGAGCAGCGCCAGGCGCTGGAAAAATACACCATCGACCTGACCGCGCGTGCCGAAAGCGGCAAGC TCGATCCGGTGATCGGCCGCGATGAAGAAATCCGCCGCACCATCCAGGTCTTGCAGCGCCGTACCAAGAACAACCCGGTG CTGATCGGCGAACCCGGCGTGGGCAAGACCGCCATTGTCGAGGGCCTGGCCCAGCGCATCATCAACGGCGAAGTGCCTGA AGGCCTGCGCGGCAAGCGCGTGCTGTCGCTGGACATGGGCGCGCTGATTGCCGGTGCCAAATTCCGCGGCGAATTCGAAG AACGCCTGAAGGCGGTGCTCAGCGACCTTTCGAAGACCGAAGGCCAGATCATCCTGTTCATCGACGAGCTGCATACCATG GTCGGTGCCGGCAAGGCCGATGGTGCGATGGATGCCGGCAACATGCTCAAGCCGGCGCTGGCACGCGGCGAGCTGCATTG CATTGGCGCCACCACGCTGGACGAATACCGCAAATACATCGAAAAAGACGCGGCATTGGAGCGCCGCTTCCAGAAAGTGT TCGTCGGCGAGCCGACCGTGGAAGACACCATTGCGATCCTGCGCGGCCTGAAGGAGCGCTACGCGGTGCATCACGGCGTG GAGATTACCGACCCGGCGATCGTCGCCGCTGCCACGCTCTCAAATCGCTACATCACCGACCGCCAGCTGCCGGACAAGGC CATCGACCTGATGGACGAAGCCGCCTCCCGCATTCGCATGGAGATCGACTCCAAGCCGGAGGAGCTTGATCGCCTGGAGC GCCGCCTGATCCAGCTCAAGATCCAGCGCGAGATGTTGAAGAAGGAAAAGGATGACGCCTCGCGCCAGCGCCTGGCGGAC CTGGAAAGCGATATCGACAAGCTCGAACGCGAGTTCTATGACCTAAACGAACTGTGGAAGTCCGAGAAGGCCGCGCTGCA GGGCACCACCAAGATCAAGGAGCAGATCGAGCACGCCAAGCTGGAACTGGAGGCCGCACAGCGCCGCCAGGACTACGCCA AGATGAGCGAGATCCAGTACGGCGTGTTGCCACAACTGGAAAAGCAGATGCTGATCGCCAACGAAGTCGAGCACCACGAC TTCAAGCTGGTGCAGGACCGCGTGACCGCCGAGGAAATTGCCGAAGTTGTATCGCGCTGGACCGGCATTCCGGTCAACAA GATGCTGGAAGGCGAGCGTGACAAGTTGCTGCGCATGGAAGACGAGCTGCATCACCGCGTGGTCGGCCAGAACGAGGCGA TCAAGGTGGTGTCCGATGCGGTACGGCGTTCGCGCGCCGGCTTGTCCGATCCCAATCGCCCGAGCGGTTCGTTTCTGTTC CTGGGCCCGACCGGCGTGGGCAAGACCGAGTTGTGCAAGGCGCTGGCCGATTTCCTGTTCGACAGCACCGAAGCGATGAT TCGCATCGACATGAGCGAGTTCATGGAGAAGCATGCGGTGGCGCGCCTGATCGGTGCGCCTCCGGGCTACGTGGGCTATG AAGAAGGCGGTTATCTCACCGAGGCGGTGCGTCGTCGTCCGTATGCGTTGATCCTGTTGGACGAAGTGGAAAAGGCGCAT GCCGATGTCTTCAACATCCTGTTGCAAGTGCTCGACGACGGCCGTCTCACCGATGGGCAGGGTCGCACCGTGGACTTTCG CAACACCGTCATCGTGATGACCTCCAACCTGGGTTCGCATCAGATCCAGGAGCTGTCCGGCGATGGTAGCGCCGAGGCCT ACACGCAGATGAAGGCAGCAGTCATGGGCGTGGTGCAGGCGCACTTCCGCCCGGAGTTCATCAACCGGCTCGACGACATC GTGGTGTTCCATCCGCTGGACAAGGCGCAGATCAAATCGATTGCGCGCATCCAGTTGCAAGGTCTGGAAAAGCGCCTGGC CGAGCGCGGCCTCAGACTGGACCTGGACGATGCGGCGCTGGAGCTGCTGGGCAATGTCGGCTTCGACCCGGTGTACGGCG CGCGCCCGCTCAAGCGCGCGATCCAGGCGCAGGTGGAGAACCCGCTGGCCCAGCAGATCCTGTCCGGCCAGTACGCCAGC GGCGAGACCGTGCGTGTGCGTGCCCAGGGTGGACGGCTGGAATTCGGCAAGGCTTGA Protein sequence : MVYQLPISSPASLETALGNRICTVSPALPATSSEDFPMRMDKLTSRFQQALADAQSLAVGRDHNIIEPVHVLAALLDQSG GSMRPLLSQAGVNVPLLRERLGEALDTLPKVSGQEGNLSIGNDLNRLLNQTDKLAQQHGDAFIASEWFVLAAADDASPLG VALRAAGGDKKKIEAAIDKLRGGETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPV LIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKTEGQIILFIDELHTM VGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGV EITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLAD LESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLEKQMLIANEVEHHD FKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLF LGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKHAVARLIGAPPGYVGYEEGGYLTEAVRRRPYALILLDEVEKAH ADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDI VVFHPLDKAQIKSIARIQLQGLEKRLAERGLRLDLDDAALELLGNVGFDPVYGARPLKRAIQAQVENPLAQQILSGQYAS GETVRVRAQGGRLEFGKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-101 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_199976.1 | ATP-dependent Clp protease subunit | VFG0080 | Protein | 8e-127 | 44 |
