Gene Information

Name : recG (XOO1151)
Accession : YP_199790.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1173693 - 1175846 bp
Length : 2154 bp
Strand : +
Note : catalyzes branch migration in Holliday junction intermediates

DNA sequence :
ATGCCGCGCGCGCGCGTCGTCACACCGAGCCTGGCCGTTGCCGGCCAGGCTCCGCTGTCCAGCCTGCCTGGTGTCGGCCC
GAAAGTGGCCGACAAATTCGCTGCGCGCGGCATCCTGAGCGTGCAGGACCTGTGGCTACATCTGCCGCTGCGTTACGAAG
ACCGCACGCGGCTGACCACCATCGCGCAGCTGCAAAGTGGCGTGCCGGCGCAGATTGAAGGACGCGTGGATGCGGTAGAG
CGTGGCTTTCGCTTTCGGCCGGTCCTGCGCGTGGCAGTGTCGGACGCATCGCACGGCACGCTGGTGCTGCGCTTCTTCCA
TTTTCGTGCTGCGCAGGTGGCGCAGTTCGCCGTCGGCACGCGTGTGCGCGTGTTCGGCACGCCTAAGCCCGGCCAGAACG
GCTGGGAGATCGTGCACCCCAGTTATCGCGTGCTCGCGCCGGATGAAGATGCCGGTCTGGGCGATAGTCTGGATCCGGTC
TATCCGGTGCTCGAAGGCGTCGGCCCGGCCACGTTGCGCAAGCTCATCGGCCAGGCGCTGGAGCGTCTACCACCCGAAGC
CGCGCTGGAATTGCTGCCGCCGCACTGGCTGCAGGACGAGCAACTGCCATCGTTACGCGCGGCATTGCTGACCATGCATC
GTCCGCCAGTCGGCACTGATCCGCAGCAATTGCTCGCCGGAGGCCATCCGGCCCAGCAGCGCCTGGCCATTGAAGAGCTG
TTGGCGCATCAACTCAGCCTGCGCCGCCAACGCATCGCGCTGCAGCGTTTCCACGCGCCCAGCCTGCCAGGCAACGGCAC
GTTGGTGCAGCAATTGCGCAGGGCCTTGCCGTTTCAGCTCACCGGCGCGCAGCAGCGGGTGTTCGAGCAGATCGCTCGCG
ACCTTGCGCAATCCTGGCCGATGCTGCGGCTGGTGCAGGGCGATGTCGGTAGCGGCAAGACCGTGGTCGCCGCATTGGCG
GCGATGCTCGCGGTTGAGCAGGGCAAGCAGGTCGCACTCGCCGCGCCCACCGAATTGCTTGCCGAGCAGCACCTCAATAA
TCTGCGGGATTGGCTGGAGCCCTTGGGCATCCGCATCGTCTGGCTGGCCGGCAAGGTCACCGGTAAGGCGCGTGCTGCGG
CGATGGCCGACGTCGCCTCAGGCCAGGCACAGGTGGTGGTCGGTACGCATGCGTTGATGCAGGAGGCGGTGGTCTTCCAC
GATCTGGCGTTGGCCATCATTGATGAGCAACACCGCTTCGGCGTGCATCAGCGGCTTGCGCTGCGCGACAAGGGCGCGGC
GGCGGGCAGTGTGCCGCACCAGCTGGTGATGACGGCTACGCCCATCCCGCGTACCTTGGCGATGTCGACCTATGCAGATC
TGGATGTCTCGGCCATCGACGAACTGCCGCCTGGTCGCACGCCAGTGCAGACGATCGTGTTGAGTGCGGAGCGCCGCCCT
GAGTTGGTCGAACGGATCCGCGCCGCCTGCGCCGAGGGGCGTCAGGCGTATTGGGTATGCACGCTGATCGAAGAAAGCGA
AGAGCCCGAAAAAGGGGCGCGAGGCCAACATGGCGGGCCGCCACGCATCGAGGCGCAAGCCGCGGAAGTCACCTTCGAAG
CGTTGTCTGCTCAATTGCCGGGCGTGCGTGTGGCGCTAGTGCACGGTCGTATGAAACCGGCCGAAAAACAGCAGGCCATG
CTGGATTTCAAGCAGGGTCGCAGCGATCTGCTGGTTGCCACCACCGTGATCGAAGTCGGCGTGGACGTCCCCAATGCGTC
GCTGATGATCATCGAAAATGCCGAGCGGCTGGGCCTGGCGCAGTTGCACCAGTTGCGTGGCCGGGTCGGGCGCGGTGCGG
CCGCTTCCAGCTGCGTGCTGTTGTATCAAGCGCCGTTGTCGATGATGGCGCGTCAGCGCCTGGAGACCATGCGCCAGACC
AACGACGGTTTCGTGATCGCGGAAAAGGATCTGGAATTGCGCGGTCCAGGCGAATTGCTAGGCACCCGGCAAACCGGTCT
GGCCAGTTTCCGCATCGCCGATCTGGCCCGCGATGCCGGCCTGCTGCCACGCGTGCAGGTGCTGGCCGAACGACTGCTGG
AGGAAGTACCGGAGATCGCCGACCGCGTGGTCGCGCGCTGGATCGGTGGCGCGGTGCGGTATGCGGCCGCTTGA

Protein sequence :
MPRARVVTPSLAVAGQAPLSSLPGVGPKVADKFAARGILSVQDLWLHLPLRYEDRTRLTTIAQLQSGVPAQIEGRVDAVE
RGFRFRPVLRVAVSDASHGTLVLRFFHFRAAQVAQFAVGTRVRVFGTPKPGQNGWEIVHPSYRVLAPDEDAGLGDSLDPV
YPVLEGVGPATLRKLIGQALERLPPEAALELLPPHWLQDEQLPSLRAALLTMHRPPVGTDPQQLLAGGHPAQQRLAIEEL
LAHQLSLRRQRIALQRFHAPSLPGNGTLVQQLRRALPFQLTGAQQRVFEQIARDLAQSWPMLRLVQGDVGSGKTVVAALA
AMLAVEQGKQVALAAPTELLAEQHLNNLRDWLEPLGIRIVWLAGKVTGKARAAAMADVASGQAQVVVGTHALMQEAVVFH
DLALAIIDEQHRFGVHQRLALRDKGAAAGSVPHQLVMTATPIPRTLAMSTYADLDVSAIDELPPGRTPVQTIVLSAERRP
ELVERIRAACAEGRQAYWVCTLIEESEEPEKGARGQHGGPPRIEAQAAEVTFEALSAQLPGVRVALVHGRMKPAEKQQAM
LDFKQGRSDLLVATTVIEVGVDVPNASLMIIENAERLGLAQLHQLRGRVGRGAAASSCVLLYQAPLSMMARQRLETMRQT
NDGFVIAEKDLELRGPGELLGTRQTGLASFRIADLARDAGLLPRVQVLAERLLEEVPEIADRVVARWIGGAVRYAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-105 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
recG YP_199790.1 ATP-dependent DNA helicase RecG BAC0356 Protein 2e-167 56