Gene Information

Name : istA (p2A371)
Accession : YP_195729.1
Strain :
Genome accession: NC_006824
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 201330 - 202418 bp
Length : 1089 bp
Strand : -
Note : -

DNA sequence :
GTGATCACAGACGAGGTGTATGTGGAAATCGAACTGTTGAGGCGTCACGGGTTGAGCCTTCGGCGGATCGCCGCCGAGGT
GGGGTGTGCGGTGAACACGGTGCGTGCGCACCTGGCGTCGCCGGGGCTGCCGCGCTACGCGCGCAAGGTCCAGCGGGTGA
CGAAGCTGGCGCCCTTCGAGGCGTACTTGCGCGAACGCCAGGCGGCGGCGCATCCGCACTGGATTCCGGCCTCGGTCCTG
ATGCGTGAGATCGTGGCGCAGGGCTATCAGGGTGGCGCCAGCCAGCTGCGCGCGTTCATGCACATGCTCAAGCCGGCGCA
GCCATCGGAGCCGGTGGTGCGCTTCGAGACGGCGCCGGGCCACCAGATGCAGGTCGACTGGGTGGAGTTTCGCAAGGGCG
CGCAGCCGCTGTACGCGTTCTGCGCCACGCTCGGCTACAGCCGCATGAGCTACGTCGAGTTTGTCACCGACATGAAGGTG
ACGACGCTGATCGGCTGCCACGAGCGCAGCTTCGCGGCGTTCGGGGGCGTGGTGCGCCAGGTGCTGTACGACAACATGAA
GACCGTGGTGCTCGAGCGCGATGTCGACGGCGAAGGCGCGCACCGCTACCACGCCGGCTTTCTGGACTACGCCCGTCACG
CCGGGTTCGTGATCAAGCTGTGCCGCCCCTATCGGGCACGGACCAAGGGCAAGGTGGAGCGCTTCAACGGCTATCTGCGG
CGCTCGTTCTACGTGCCGCTGGTGGCGCAGTTCAAGCAGGCCGGTCTGGTGCTCGACGCCGCCACGGCCACGGTGCAGGT
GCGCCGCTGGCTCGACGAAGTCGCCAACGTGCGCGTGCATGGCACCACCGGCGAGCAACCGGTAGCGCGGCTGGCGGCCG
AACGGGCTGCGCTGCAGGCGCTGGCACCGCCGTGGCGGGGCGACATCGAGGGCGCCCGGCCGCAGGCTGAGGCGGCACAC
GACGAGGGCCCCGTGCGCCCGCCCGCCGTGCGTGCGCACCTCGAAACGGAACAACCCGCCCAGCATCCGCTGGCCGTCTA
CGACGCGTTGCTGCAGACGCTGCAACAGGCGCAGGAGATCGGCGCATGA

Protein sequence :
MITDEVYVEIELLRRHGLSLRRIAAEVGCAVNTVRAHLASPGLPRYARKVQRVTKLAPFEAYLRERQAAAHPHWIPASVL
MREIVAQGYQGGASQLRAFMHMLKPAQPSEPVVRFETAPGHQMQVDWVEFRKGAQPLYAFCATLGYSRMSYVEFVTDMKV
TTLIGCHERSFAAFGGVVRQVLYDNMKTVVLERDVDGEGAHRYHAGFLDYARHAGFVIKLCRPYRARTKGKVERFNGYLR
RSFYVPLVAQFKQAGLVLDAATATVQVRRWLDEVANVRVHGTTGEQPVARLAAERAALQALAPPWRGDIEGARPQAEAAH
DEGPVRPPAVRAHLETEQPAQHPLAVYDALLQTLQQAQEIGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 4e-66 49
unnamed CAA21403.1 - Not tested HPI Protein 4e-66 49
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 3e-66 49
api83 CAF28557.1 transposase Not tested YAPI Protein 3e-66 49
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 4e-66 49
y2411 NP_669718.1 transposase Not tested HPI Protein 4e-66 49
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 8e-67 43
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 1e-66 43
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 8e-67 43
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 8e-67 43
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 8e-67 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istA YP_195729.1 transposase VFG1607 Protein 5e-67 43
istA YP_195729.1 transposase VFG1461 Protein 8e-67 43
istA YP_195729.1 transposase VFG1514 Protein 5e-67 43
istA YP_195729.1 transposase VFG1626 Protein 5e-67 43