Gene Information

Name : istB (p2A369)
Accession : YP_195728.1
Strain :
Genome accession: NC_006824
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 200554 - 201333 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence : 
ATGAACCTGCAATACGAACGGATCCAGGCGCTGTGCCAGACGCTGAGCCTGCCGCTCACCGCCCAAGGCTACGCCGCAGC
GGCCCAGCAGGCGGCCACCGACCAACTGGCCTACAGCGACTTCCTCGAGCAGTTGCTGCGGGCCGAGGCGGCCGGTCGTC
AGAGCCGCAAGCAAAGCATGCTCACGCGCCTGGCGGGCTTCCCCGCGATCAAGACGCTCGAGGACTTCGACTATGGCTTT
GCCAGCGGGCTCAAGCGCAGCCAGATCGAGGAGTTGGCCAGCCTCGCCTTCGTCGAGCGTGCCGAGAACGTCGTGCTGGT
GGGCCCCAGCGGGGTGGGTAAGACCCATCTGGCCATCGCGCTGGGCTACCGCGCCACGCAGGCCGGCATCAAGACGCGCT
TCACCACCGCCGCCGACCTGCTGCTGACGCTGGTCCTGGCGCATGAGCGCAACCAGCTCAAGAACGTGATGCAGCGGGCG
ATCAACGCCTACCGGCTGTTGATCGTCGACGAGATCGGCTACCTGCCGATGACGCGCGAGCAGGCCAACCTGTTCTTCCA
GGTGATCGCGGCGCGCTACGAGCGGGGCAGCCTGATCGTGACCAGCAATCTGTCGTTCGGGCAGTGGGACAGCACCTTCG
CCCAGGATGCGACGCTCACGGCGGCCCTGCTGGATCGGTTGCTGCATCACGCGCACATCGTGCCGATCAGCGGCGAGAGC
TACCGGCTGAAACACCAGCGCAAGGCCGGGATGGTGCAAGCGCTGGCGGTCGCCGGCTGA

Protein sequence : 
MNLQYERIQALCQTLSLPLTAQGYAAAAQQAATDQLAYSDFLEQLLRAEAAGRQSRKQSMLTRLAGFPAIKTLEDFDYGF
ASGLKRSQIEELASLAFVERAENVVLVGPSGVGKTHLAIALGYRATQAGIKTRFTTAADLLLTLVLAHERNQLKNVMQRA
INAYRLLIVDEIGYLPMTREQANLFFQVIAARYERGSLIVTSNLSFGQWDSTFAQDATLTAALLDRLLHHAHIVPISGES
YRLKHQRKAGMVQALAVAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-44 63
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-55 58
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-55 58
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-55 58
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-55 58
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-55 58
unnamed CAA21402.1 - Not tested HPI Protein 2e-55 58
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-55 58
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-55 58
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-55 58
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 2e-55 58
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 2e-55 58
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 3e-55 58
istB AAN62229.1 putative NTP-binding protein of insertion sequence Not tested PAGI-3(SG) Protein 1e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istB YP_195728.1 transposase/IS protein VFG1460 Protein 9e-45 63
istB YP_195728.1 transposase/IS protein VFG1515 Protein 9e-56 58
istB YP_195728.1 transposase/IS protein VFG1627 Protein 9e-56 58
istB YP_195728.1 transposase/IS protein VFG1606 Protein 9e-56 58
istB YP_195728.1 transposase/IS protein VFG1663 Protein 2e-55 58