Gene Information

Name : istB (p2A283)
Accession : YP_195688.1
Strain :
Genome accession: NC_006824
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 157540 - 158319 bp
Length : 780 bp
Strand : +
Note : -

DNA sequence :
ATGAACCTGCAATACGAACGGATCCAGGCGCTGTGCCAGACGCTGAGCCTGCCGCTGACCGCCCAAGGCTACGCCGCAGC
GGCCCAGCAGGCGGCCACCGACCAACTGGCCTACAGCGACTTCCTCGAGCAGTTGCTGCGGGCCGAGGCGGCCGGTCGTC
AGAGCCGCAAGCAAAGCATGCTCACGCGCCTGGCGGGCTTCCCGGCGATCAAGACGCTCGAGGACTTCGACTATGGCTTT
GCCAGCGGGCTCAAGCGCAGCCAGCTCGAGGAGTTGGCCAGCCTCGCCTTCGTCGAGCGTGCCGAGAACGTTGTGCTGGT
GGGCCCCAGCGGGGTGGGCAAGACCCATCTGGCCATCGCGCTGGGCTACCGCGCCACGCAGGCCGGCATCAAGACGCGCT
TCACCACCGCCGCCGACCTGCTGCTGACGCTGGTCCTGGCGCATGAGCGCAACCAGCTCAAGAACGTGATGCAGCGGGCG
ATCAACGCCTACCGGCTGTTGATCGTCGACGAGATCGGCTACCTGCCGATGACGCGCGAGCAGGCCAACCTGTTCTTCCA
GGTGATCGCGGCGCGCTACGAGCGGGGCAGCCTGATCGTGACCAGCAATCTGTCGTTCGGGCAGTGGGACAGCACCTTCG
CCCAGGACGCGACGCTCACGGCGGCCCTGCTGGATCGGTTGCTGCATCACGCGCACATCGTGCCGATCAGCGGCGAGAGC
TACCGGCTGAAACACCAGCGCAAGGCCGGGATGGTGCAAGCGCTGGCGATCGCCGGCTGA

Protein sequence :
MNLQYERIQALCQTLSLPLTAQGYAAAAQQAATDQLAYSDFLEQLLRAEAAGRQSRKQSMLTRLAGFPAIKTLEDFDYGF
ASGLKRSQLEELASLAFVERAENVVLVGPSGVGKTHLAIALGYRATQAGIKTRFTTAADLLLTLVLAHERNQLKNVMQRA
INAYRLLIVDEIGYLPMTREQANLFFQVIAARYERGSLIVTSNLSFGQWDSTFAQDATLTAALLDRLLHHAHIVPISGES
YRLKHQRKAGMVQALAIAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 7e-45 64
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 9e-56 58
api84 CAF28558.1 putative transposase Not tested YAPI Protein 9e-56 58
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 9e-56 58
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-55 58
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 9e-56 58
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-55 58
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 9e-56 58
unnamed CAA21402.1 - Not tested HPI Protein 1e-55 58
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 9e-56 58
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-55 58
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-55 58
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-55 58
istB AAN62229.1 putative NTP-binding protein of insertion sequence Not tested PAGI-3(SG) Protein 2e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istB YP_195688.1 transposase/IS protein VFG1460 Protein 4e-45 64
istB YP_195688.1 transposase/IS protein VFG1627 Protein 5e-56 58
istB YP_195688.1 transposase/IS protein VFG1606 Protein 5e-56 58
istB YP_195688.1 transposase/IS protein VFG1663 Protein 9e-56 58
istB YP_195688.1 transposase/IS protein VFG1515 Protein 5e-56 58