Gene Information

Name : istA (p2A256)
Accession : YP_195677.1
Strain :
Genome accession: NC_006824
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 145599 - 147095 bp
Length : 1497 bp
Strand : -
Note : -

DNA sequence :
GTGCCCGGCAGGAAGATCACGGACGAACAAGTGCGCAAATACAAGGAAGCAAGAAGGCAGGCGACGCAGCAGATCGCCGC
GGCCCGGATGGGCATCAGCGTACGCTCGGCACGGCGCATCGAGCAGGCCGACGGACTGCCGTCGCAAGAAGGAGCGAGGA
CATGGCGAACGCGTGCCGACCCGCTGGCGGGGGTGTGGGAGGAAGAGCTGGTACCGCTGCTCGAGCGCGAGCCGGGGCTG
CAGGGCCGTACGCTGCTCGAGGAGTTGCAGCGCCGGCACGGTGAGGTGTTCGGCGATGGCGTGCTACGCACGCTGCAGCG
GCGGATTCGCCTGTGGCGGGCCGAGCATGGTCAGGAGAAGGAGGTCTTCTTCGCCCAGTCCAACCCGCCCGGGCGGCTGG
CACTGTCCGACTTCACCGTGTGCAACGAACTGAATGTCTCGATCGCCGGCGAGCACTTCGAGCATCGCCTGTACCAGTTC
GCGCTCGCCTACTCAGGCTGGCGCCATGCCGAGCTCGTGTGCGGCGGCGAGAGCTTCGCCGCGCTGGCGCAGGGGCTGCA
GAATGCCTTGTGGGCCCTGAGCGGCGTGCCCGAAGAGCACCGCACCGACAGCCTGTCGGCCGCCTTCAACAACCTGGCCG
AAGCGGAAACGCTCACGCGCCGCTATGCAGACCTGTGCCGGCACTATGGCATGCGTCCGACGCGGAACAATCTTGGGCAG
TCGCACGAGAACGGCGCGATCGAATCGCGCCAGGGCAGTCTCAAGGGCGCGCTCGATCAGGCATTGCTGCTGCGCGGGCA
TCGCGACTTTGCCACGGTCGCCGACTACCAACGCGTCGTCGCCGATGTCGTTGCACGGCTGAACCGACGCATCCAGACGC
AGCTGACCGAGGAGCGCAGCCAACTCAAGGCGCTGCCGATTCGCCGCACCAGCGAGTACGAGGAGATCGAGGCACGCGTG
ACCAAGTTCGGTACGGTCAGCATCCGGCGCGTGCTCTACAGCGTGCCCTCGCGCCTGATCGGCCACCGGCTCCAGTTCCG
TCTCTACCCGGAGCGCCTGGAAGGCTGGCTCGGCGGAGTGTCCGTGTTCGAGAGCGTGCGTGGGACGGTGCCGGCGGGAA
AACCACGCGGCAAGCAGATCGACTACCGCCACCTGTTGCCCGCGCTCAAGCGCAAGCCCGGCGCCTTCGCCCGCTGGGCG
CTGCGCGACGAGATGTTCCCCCGCACAGAGTACCGGCAGACCTGGGAGCGGCTCGTCGAGAAACTACCCGAGCGCCAGGC
GTGCAAGCTCATGGTCGGCCTGCTCGATCTGGCCGCACGCGGTGCCTGTGAAGCGCAACTGGCACAGGTGCTCGGCGAGG
TGCTGCAGGCGGACGCCGTGCCCGATCTGGACACGCTGGCGGAGCGCTTCGCACCGCGCGAGACACCGATGCCGGTGGTC
ACCGTGTCGTTGCCGACGCTGTCGGCCTACGACGACTTGTTCGCGGTGGCGGCATGA

Protein sequence :
MPGRKITDEQVRKYKEARRQATQQIAAARMGISVRSARRIEQADGLPSQEGARTWRTRADPLAGVWEEELVPLLEREPGL
QGRTLLEELQRRHGEVFGDGVLRTLQRRIRLWRAEHGQEKEVFFAQSNPPGRLALSDFTVCNELNVSIAGEHFEHRLYQF
ALAYSGWRHAELVCGGESFAALAQGLQNALWALSGVPEEHRTDSLSAAFNNLAEAETLTRRYADLCRHYGMRPTRNNLGQ
SHENGAIESRQGSLKGALDQALLLRGHRDFATVADYQRVVADVVARLNRRIQTQLTEERSQLKALPIRRTSEYEEIEARV
TKFGTVSIRRVLYSVPSRLIGHRLQFRLYPERLEGWLGGVSVFESVRGTVPAGKPRGKQIDYRHLLPALKRKPGAFARWA
LRDEMFPRTEYRQTWERLVEKLPERQACKLMVGLLDLAARGACEAQLAQVLGEVLQADAVPDLDTLAERFAPRETPMPVV
TVSLPTLSAYDDLFAVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 3e-83 44
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 6e-84 44
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 6e-84 44
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-84 44
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-84 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istA YP_195677.1 transposase VFG1728 Protein 4e-84 44