Gene Information

Name : istA (p1B195)
Accession : YP_195414.1
Strain :
Genome accession: NC_006823
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 109345 - 110841 bp
Length : 1497 bp
Strand : -
Note : -

DNA sequence :
GTGCCCGGCAGGAAGATCACGGACCAACAAGTGCGCAAATACACGGAAGCAAGAAGGCAGGCGACGCAGCAGATCGCAGC
GGCCCGGATGGGCATCAGCGTGCGCTCGGCGCGACGCATCGAGCAGGCAGACGGGTTGCCGTCTCAGGGTGGGCCGAGGA
CCTGGAGGACACGTGCCGACCCGCTGGCGGGAGTGTGGGAGGAGGAGTTGCTGCCGCTGCTCGCGCGCGAGCCGGGGTTG
CAGGGCCGTACGCTGCTCGAGGAGTTGCAGCGTCGGCACGGTGATGTGTTCGGTGATGGCGTGTTGCGCACGCTGCAGCG
GCGGATTCGCATGTGGCGGGCCGAGCATGGCCAGGAGAAGGAGGTCTTCTTCGCCCAGTCCAATCCGCCCGGGCGGCTGG
CACTGTCCGACTTCACGGTGTGCAACGAATTGAACGTCTCGATCGCCGGTGAGCGTTTCGAGCATCGCCTGTACCAGTTC
GCGCTCGCCTACTCGGGCTGGCGCCACGCCGAACTCGTGTGCGGCGGCGAGAGCTTCGCCGCGCTGGCGCAGGGGCTGCA
GAACGCCCTGTGGGCCTTGGGCGGCGTGCCCGAGGAGCACCGCACCGACAGCCTGTCGGCCGCCTTCAATAACTTGGCGG
AAGCGGAAACGCTCACGCGCCGCTATGCAGACCTTTGCCAGCACTATGGCATGCGTCCGACGCGGAACAATCTCGGGCAA
TCGCATGAGAACGGCGCGATCGAATCGCGCCAGGGCAGTCTCAAGGGCGCGCTCGATCAGGCATTGCTGCTGCGCGGGCA
TCGCGACTTTGCCACGGTCGCCGACTACCAACGCGTCGTCGCCGATGTCGTTGCACGGCTGAACCGACGCATCCAGACAC
CGCTGACCGAGGAGCGCAGCCAGCTCAAGGCGCTGCCGGTTCGCCGCACCAGCGAGTACGAGGAGATCGAGGCGCGCGTG
ACCAAGTTCGGTACGGTCAGCATACGGCGCGTGCTCTACAGCGTGCCCTCGCGCCTGATCGGCCACCGGCTCCAGTTCCG
GCTCTACCCGGAGCGCCTGGAGGGCTGGCTCGGCGGGGTGTCCGTGTTCGAGAGCGTGCGTGGGACGGTGCCGGCGGGCA
AGCCACGCGGCAAGCAGATCGACTACCGCCACCTGTTGCCCGCGCTCAAGCGCAAGCCCGGCGCCTTCGCCCGCTGGGCG
CTGCGCGACGAGATGTTCCCCCGCACCGAGTACCGGCAGACCTGGGAGCGGCTCGTCGAGAAACTGCCCGAGCGCCAGGC
GTGCAAGCTCATGGTCGGTCTGCTCGATCTGGCCGCACGCGGCGCCTGTGAAGCGCAACTGGCACAGGTGCTCGGCGAGG
TGCTGCAGGCGGACGCCGTACCCGATCTGGACGCGCTGGCGGAGCGCTTCGCACCGCGCGAGACACCGATGCCGGTGGTC
ACCGTGTCGTTGCCGCCGCTGTCGGCCTACGACGACTTGTTCGCGGTGGCGGCATGA

Protein sequence :
MPGRKITDQQVRKYTEARRQATQQIAAARMGISVRSARRIEQADGLPSQGGPRTWRTRADPLAGVWEEELLPLLAREPGL
QGRTLLEELQRRHGDVFGDGVLRTLQRRIRMWRAEHGQEKEVFFAQSNPPGRLALSDFTVCNELNVSIAGERFEHRLYQF
ALAYSGWRHAELVCGGESFAALAQGLQNALWALGGVPEEHRTDSLSAAFNNLAEAETLTRRYADLCQHYGMRPTRNNLGQ
SHENGAIESRQGSLKGALDQALLLRGHRDFATVADYQRVVADVVARLNRRIQTPLTEERSQLKALPVRRTSEYEEIEARV
TKFGTVSIRRVLYSVPSRLIGHRLQFRLYPERLEGWLGGVSVFESVRGTVPAGKPRGKQIDYRHLLPALKRKPGAFARWA
LRDEMFPRTEYRQTWERLVEKLPERQACKLMVGLLDLAARGACEAQLAQVLGEVLQADAVPDLDALAERFAPRETPMPVV
TVSLPPLSAYDDLFAVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 1e-86 45
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 1e-86 45
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-86 45
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-86 45
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 8e-86 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istA YP_195414.1 transposase VFG1728 Protein 9e-87 45