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Name : hslU (LBA0985) Accession : YP_193867.1 Strain : Lactobacillus acidophilus NCFM Genome accession: NC_006814 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 959623 - 961023 bp Length : 1401 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGGCTATAAAGACCCCAAAAGAAATAGTTAAAATCTTAAATGAATATATTATTGGCCAAGATGAAGCAAAAAAATCTGT AGCGATTGCTTTGTATAATCGCTATCGTAGAATGCAATTGCCAAAACAAATGCAACGTGAAATCACACCTAAGAACTTAC TTATGGCTGGTCCTACCGGTGTAGGTAAAACTGAAATTGCTCGCCGCTTAGCTACAATTGTTGAAGCTCCATTTGTTAAG GTTGAAGCAACTAAATTTACTGAAGTTGGTTATGTTGGTCGTGACGTTGAATCAATGGTGCGTGACTTAGTTGGCGAAGC CGTTAGGATGGAAGAAAAAGACCAATTTGCACGTGTAAAACCTCAAGCTACTAAAGAGGCTAATAAAGAATTAGTTCGTT TGCTTGCACCTGGCGAAAAGCGTGAAAAACGTGAGAATCAAGTACAACAGATGCAAGATATGATGTCCATGTTAATGGGT GGAATGAATAACCAAACTAATAATAACCAAGAGGAAATTAGTGAAGAAGTTCGTAACCAAAGAATGGACGTAGCTGAAAA ATTAAATAAGGATCTTCTTGAAGACCGTGAGGTTACTATTGAAGTTGAGCAAGCTCCCAAAGCTAATCCAATGAGCGATA TGATGGGACAAATGGGCATGGACATGGGCTCAATGCTTAATGACATTATGCCTAAAAAGAAGGTTAAGCGTACTTTACCA GTTAGAGAAGCACGTGAAGTTTTAATTCAAGAAGAATCACGTAAATTAGTTGACTATGATACTATTTACCAACGTGCAAT TGAACGAAGCCAAAATAATGGTATTATATTTATCGACGAAATTGATAAGATTATTGCTGGTAATAAGCGTAATTCTGGTG AAGTTTCTCGTGAAGGTGTACAAAGAGATATTTTGCCAATCGTTGAAGGTTCAACAGTTAATACAAAATATGGTCCTGTT TCAACCGATCATATTTTATTCATTGCAGCTGGTGCATTTGCTGAAAGTAAACCAAGTGATTTAATTCCTGAACTTCAAGG TCGTTTTCCAATTAGAGTAGAACTTAACGCTTTAACTAAAGATGATTTTGTTAAGATCTTGAAGGACCCACAAAACTCAC TTTTAAAGCAATATATTGCACTGCTTAAAGCTGACGGAATTAAATTGATTTTTACTCAAGAAGCAGTTGATAAAATTGCA GAAATTGCCTTCGATGTTAACCAAGGAACTGATAATATCGGTGCAAGACGCCTTTCTACTATTTTAGAAAAGTTGCTTGA AGATGTTCTTTACGAAGGGCCAGATATGGAAATGGGTGAAATTACTATTACTGAAGCTTATGTTGAAGAAAAGCTTGGTG ATATCATCATGAATAAGGATTTAACTAAGTTTATTCTTTAG Protein sequence : MAIKTPKEIVKILNEYIIGQDEAKKSVAIALYNRYRRMQLPKQMQREITPKNLLMAGPTGVGKTEIARRLATIVEAPFVK VEATKFTEVGYVGRDVESMVRDLVGEAVRMEEKDQFARVKPQATKEANKELVRLLAPGEKREKRENQVQQMQDMMSMLMG GMNNQTNNNQEEISEEVRNQRMDVAEKLNKDLLEDREVTIEVEQAPKANPMSDMMGQMGMDMGSMLNDIMPKKKVKRTLP VREAREVLIQEESRKLVDYDTIYQRAIERSQNNGIIFIDEIDKIIAGNKRNSGEVSREGVQRDILPIVEGSTVNTKYGPV STDHILFIAAGAFAESKPSDLIPELQGRFPIRVELNALTKDDFVKILKDPQNSLLKQYIALLKADGIKLIFTQEAVDKIA EIAFDVNQGTDNIGARRLSTILEKLLEDVLYEGPDMEMGEITITEAYVEEKLGDIIMNKDLTKFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-83 | 47 |
