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Name : xerD (LBA0959) Accession : YP_193842.1 Strain : Lactobacillus acidophilus NCFM Genome accession: NC_006814 Putative virulence/resistance : Unknown Product : integrase-recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 936387 - 937292 bp Length : 906 bp Strand : + Note : XerD; COG4974 Site-specific recombinase XerD DNA sequence : ATGACGAATAGTAATTTAGAAGATCAAATTGATGATTATCTACGTTATAGTCAAATTGAACGTGGACTAAGTGTTAATAC TATCAATGCATATCGTCAAGATTTAGAAGAATATTTAACCTTTGTTAAAAAAGAAAATATGACTTCGTGGCCTACTGAAG CTACTGATGTAGATGCCTTTTTGGCTCGTCAGCATGATCTTAATAAAGCGACTAGTTCAATTAGCCGTCTTATTTCGAGT TTACGGAAGTTTTATCAATGGCTAGCTCGTCAGAATATTCAAAAATTGAATCCAATGTTAGAGATTGATTTACCTAAAAA AGAGCATAAATTACCAATTGCGTTAACTCAGGACGAAGTGGTAAATTTATTGGATCAACCAAATACTAAGCAGAAATTAG GCTTGCGCGATAAAGCTATTTTGGAGACTTTATATGCTACAGGTATGCGAGTTAGTGAATTAATAAATTTGAAATTACAA GATCTTCATGAAGATCTTGGTTTAGTGCGAGTACTAGGTAAGGGGGCCAAAGAGCGGTTAATACCTATTAGTTCTGTAGC ACTTGATTGGCTAAAAAAATATGAAAAGCAAGTACGTGACCCACTTATATTAAATGTGGGTAAAGATGATGAACATATTT TTTTGAATAATAGAGGAAAACAGCTCACTCGACAAGCTATTTGGCAGATGATTAAAAAGTATTGTCAATTAGCAGGGATT GCTAAAGATGTTACGCCTCATACTTTACGTCATACTTTTGCTACTCATTTACTTGAAAATGGTGCAGATTTACGAGTTGT ACAAGAAATATTAGGACACTCAGATATTAGTACAACGCAAATTTACACTAATTTATCGCAAAAACATATCTTGCAAGTAT ATCAGAAGACACATCCTCGTCTTTAG Protein sequence : MTNSNLEDQIDDYLRYSQIERGLSVNTINAYRQDLEEYLTFVKKENMTSWPTEATDVDAFLARQHDLNKATSSISRLISS LRKFYQWLARQNIQKLNPMLEIDLPKKEHKLPIALTQDEVVNLLDQPNTKQKLGLRDKAILETLYATGMRVSELINLKLQ DLHEDLGLVRVLGKGAKERLIPISSVALDWLKKYEKQVRDPLILNVGKDDEHIFLNNRGKQLTRQAIWQMIKKYCQLAGI AKDVTPHTLRHTFATHLLENGADLRVVQEILGHSDISTTQIYTNLSQKHILQVYQKTHPRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 2e-47 | 42 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 2e-47 | 42 |
