Gene Information

Name : bshA (LBA0892)
Accession : YP_193782.1
Strain : Lactobacillus acidophilus NCFM
Genome accession: NC_006814
Putative virulence/resistance : Virulence
Product : bile salt hydrolase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3049
EC number : -
Position : 869317 - 870294 bp
Length : 978 bp
Strand : -
Note : -

DNA sequence :
ATGTGTACATCAATTATATTCAGTCCCAAAGATCATTACTTTGGTCGTAACCTTGATTTAGAAATTACTTTTGGTCAACA
AGTTGTTATTACGCCACGCAATTACACTTTTAAATTCCGTAAGATGCCCAGTTTAAAAAAGCACTATGCAATGATTGGTA
TCTCATTAGATATGGATGATTATCCCCTATATTTCGACGCTACAAATGAAAAAGGTTTAGGTATGGCCGGACTCAACTAT
CCAGGAAATGCTACATATTATGAAGAAAAAGAAAATAAAGATAATATTGCTTCCTTTGAATTCATCCCTTGGATTTTAGG
ACAGTGTAGCACTATTAGCGAAGTAAAGGATTTACTTAGCAGAATCAACATCGCCGATTTAAATTTCAGCGAAAAAATGC
AAGCCTCCTCTCTTCACTGGCTTATTGCAGATAAAACAGGTACATCATTAGTTGTTGAAACAGACAAAGATGGAATGCAT
ATTTATGATAATCCAGTTGGCTGCTTAACTAATAATCCACAATTTCCAAAGCAATTATTCAATTTAAATAACTATGCTGA
CGTATCTCCAAAAATGCCTAAAAATAACTTCTCAGATAAAGTAAATATGGCTGGCTACAGCCGTGGATTAGGGTCTCACA
ACTTACCAGGTGGAATGGATTCTGAATCACGTTTTGTCAGAGTAGCTTTCAATAAATTTAATGCTCCAATTGCTGAAACC
GAAGAAGAAAATATTGATACTTACTTCCACATTTTACATTCGGTTGAACAACAAAAGGGACTGGATGAAGTTGGTCCAAA
CTCATTTGAATATACAATTTATTCTGATGGAACTAACTTAGACAAAGGTATTTTCTACTACACCACTTATTCAAACAAAC
AAATTAACGTTGTTGATATGAATAAAGAAGATCTAGATAGCAGCAATTTGATCACTTATGATATGCTTGATAAAACTAAA
TTTAACCATCAAAACTAA

Protein sequence :
MCTSIIFSPKDHYFGRNLDLEITFGQQVVITPRNYTFKFRKMPSLKKHYAMIGISLDMDDYPLYFDATNEKGLGMAGLNY
PGNATYYEEKENKDNIASFEFIPWILGQCSTISEVKDLLSRINIADLNFSEKMQASSLHWLIADKTGTSLVVETDKDGMH
IYDNPVGCLTNNPQFPKQLFNLNNYADVSPKMPKNNFSDKVNMAGYSRGLGSHNLPGGMDSESRFVRVAFNKFNAPIAET
EEENIDTYFHILHSVEQQKGLDEVGPNSFEYTIYSDGTNLDKGIFYYTTYSNKQINVVDMNKEDLDSSNLITYDMLDKTK
FNHQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 8e-89 56
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 6e-89 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
bshA YP_193782.1 bile salt hydrolase VFG2162 Protein 4e-93 57