|
Name : clpE (LBA0638) Accession : YP_193548.1 Strain : Lactobacillus acidophilus NCFM Genome accession: NC_006814 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 623869 - 626055 bp Length : 2187 bp Strand : - Note : ClpE DNA sequence : TTGCTTTGCCAAAATTGTCATCAACGGCCTGCCGCTATTCACCTTTTTACAAAGGTAAATGGTCAAAGCCGTGAAATTGA TTTATGTCAACAATGTTATCAAGAATTAAGAAATCAACAAGGAAATCTAGAAAATATGAACAACAATAACGAATTTTTTG GCGACTTTGATGATTTATTTAACGCATTAAACGGAAATAACAACAACGCCGCAAATAACAATAATAATATGAAAAATAAC GACCCAAGAATGCAAATGGGTGGTGGAAATGGTGGTCAAGGTGGTAGAAGCTTACTTGATCAATATGGTACTGATTTAAC TGCTCTTGCTAAAAAAGGTAAAATCGATCCAGTTATCGGTCGTGATAAAGAAATCGCTCGCGTAATTGAAATTTTAAACA GAAGGACTAAGAATAATCCAGTTTTAATTGGTGAAGCCGGTGTTGGTAAGACAGCTGTAGTTGAAGGCCTTGCTCAAGAA ATTGTAGATGGTTCTGTTCCAGCTAAACTTCAGAATAAACGTATTATTTCATTAAATGTTGTATCACTTGTTCAAGGTAC TGGCATTCGTGGTCAATTTGAACAAAGAATGGAACAATTGATTAGAGAATTACAACAAAATGATGATATCATCCTCTTTA TTGATGAAATTCATGAAATTGTAGGCGCCGGAAATGCCGAAGGCGGTATGGACGCAGGTAATATTATCAAACCTGCTTTA GCTCGTGGTGAACTCCAATTAGTTGGTGCTACTACTATTAAAGAATATCGTGATATTGAAAAAGATTCAGCTTTAGCACG TAGATTCCAACCAGTTGAAGTAAAAGAGCCTTCAATTGATGAAACGATTCGCATTTTGAAGGGAATCCAACAACGTTATG AAGACTATCATCATGTTCAATACTCCGATGATTCCATTGAGTCTGCTGTTAAATTATCAGCTAGATACATTCAAGATAGA TTCTTACCTGACAAGGCTATTGATCTTTTAGATGAAGCCGGTTCAAGAATGAATTTAACTATTCCTTATATTGATAAAGG AAAAATGCAAGAACGTATTAACGCTGCAGAACAATTAAAAGAGGAATCTTTAAAGAACGAAGACTACGAAAAAGCAGCTT ATTATCGTGATCAAATCGAAAAATATGAAAAGATGAAGGATCAAAAAGTTGATCCTGATAAATCACCAATTATTACCGAT AAGATTATGAACAAGATTGTCGAAGAAAAGACAGGAATTCCTGTTGGTGATATTCAAAAGCAAGAAGAAAATCAATTGCA AAACTTGGCTAGTGATTTAAAGTCTAATGTTATTGGTCAAGACAAGGCAGTCGAAAAAGTTGCTCGAGCTATTCGACGTA ACAGAATCGGTTTCAATAAGTCAGGACGTCCAATTGGTTCCTTCCTATTTGTTGGGCCAACCGGTGTTGGTAAGACCGAA TTAGCTAAACAACTAGCCAAGCAAATGTTTGGTTCAGAAGATGCCATGATTCGTTTCGATATGTCAGAATACATGGAACA ATATTCTGTCTCCAAATTAATCGGCTCTGCTCCAGGTTACGTAGGTTATGAAGAAGCTGGTCAATTAACTGAACAAGTTC GCCATAATCCATATAGCTTGATTCTACTTGATGAAATTGAAAAAGCTCATCCAGATGTTTTGAATCTTTTCTTACAAATC TTAGACGACGGCCGCTTAACTGACTCTCAAGGTAGAACCGTTTCATTTAAGGATACTATTATTATTATGACTTCTAACGC AGGCCAAGGTATCAAGAATGCCAGCGTTGGTTTTACTGCTGAAAATGATGACGAATCTAGCGAATCAGCAAGAAATAATA TGAGTCAATTCTTTAAACCAGAATTTTTAAATCGTCTAGATGATGTAATTGAATTCAATGAATTGACTAAGCCAGACTTA TTGGAAATTGTAGATCTTATGCTTCAAAACACTAACAATATGGTTAAGGATCAAGGCTTACATATTGACGTAACCTCAGC TGCTAAAAATAAGCTTGTTGAAGAAGGCTTTAATCCTGCTTTAGGTGCCCGTCCTCTTCGTCGTACAATTCAAGAAGAAA TTGAAGATAAAGTTGCAGATTACAAGCTTGACCATACTGAAAGTAAAAACTTAAAGGCTGACGTAATTAATGATCAAATC GTAATCAGTGACGAAACAGCTCAATAA Protein sequence : MLCQNCHQRPAAIHLFTKVNGQSREIDLCQQCYQELRNQQGNLENMNNNNEFFGDFDDLFNALNGNNNNAANNNNNMKNN DPRMQMGGGNGGQGGRSLLDQYGTDLTALAKKGKIDPVIGRDKEIARVIEILNRRTKNNPVLIGEAGVGKTAVVEGLAQE IVDGSVPAKLQNKRIISLNVVSLVQGTGIRGQFEQRMEQLIRELQQNDDIILFIDEIHEIVGAGNAEGGMDAGNIIKPAL ARGELQLVGATTIKEYRDIEKDSALARRFQPVEVKEPSIDETIRILKGIQQRYEDYHHVQYSDDSIESAVKLSARYIQDR FLPDKAIDLLDEAGSRMNLTIPYIDKGKMQERINAAEQLKEESLKNEDYEKAAYYRDQIEKYEKMKDQKVDPDKSPIITD KIMNKIVEEKTGIPVGDIQKQEENQLQNLASDLKSNVIGQDKAVEKVARAIRRNRIGFNKSGRPIGSFLFVGPTGVGKTE LAKQLAKQMFGSEDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTEQVRHNPYSLILLDEIEKAHPDVLNLFLQI LDDGRLTDSQGRTVSFKDTIIIMTSNAGQGIKNASVGFTAENDDESSESARNNMSQFFKPEFLNRLDDVIEFNELTKPDL LEIVDLMLQNTNNMVKDQGLHIDVTSAAKNKLVEEGFNPALGARPLRRTIQEEIEDKVADYKLDHTESKNLKADVINDQI VISDETAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-153 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_193548.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0080 | Protein | 0.0 | 61 |
| clpE | YP_193548.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0079 | Protein | 6e-158 | 51 |
