Gene Information

Name : cadB (LBA0021)
Accession : YP_192958.1
Strain : Lactobacillus acidophilus NCFM
Genome accession: NC_006814
Putative virulence/resistance : Resistance
Product : cadmium resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4300
EC number : -
Position : 19827 - 20474 bp
Length : 648 bp
Strand : +
Note : CadD

DNA sequence : 
ATGTTATTTGGAGGAAATCGAAATAAAATGTTAAAAACTATTATTACCAGTGCAATCACATATAGTAGTACCGCTATAGA
TTTATTAATAATTTTGATGCTCTTCTTTGCCAAAATTAAAGACAAAAAAGGTATTAGAGACATTTATATAGGACAATTCC
TTGGATCTGATGTTCTAATACTAGTTAGTTTATTCTTTGCTTTTATATTGCATTATGTTCCTGATAAACGGTTATTAGGA
CTACTTGGAATAATCCCTATATTTTTAGGATTAAAGGCTTTAATTTTTGGTGACTCCGATGGTGAAAAGATGGCCAATAA
GGAACTGAATAATAATAATAATAAAATGAATTTAATAAAAACTCTTATGTTCATTACTATCGTAAGTTGTGGGGCTGATA
ATATTGGACTATTTGTACCTTACTTCATTAGTTTGACACCATTGAATTTGGTAATAACCTTGATTGTATTTTTGATAATG
ATTTTTTTGTTAGTTTTTGTTGCTCAAAAATTGGCTAATGTTCCTACTATAGGTGAGGTTCTTGAAAAATATAGTCGTTG
GTTCATAGGATTCGTCTATATTTTTATTGGCGGTTCTGTTTTAATTGAAAATGGATCAATTCAATTTATAATTAATTTAT
TTAAATAA

Protein sequence : 
MLFGGNRNKMLKTIITSAITYSSTAIDLLIILMLFFAKIKDKKGIRDIYIGQFLGSDVLILVSLFFAFILHYVPDKRLLG
LLGIIPIFLGLKALIFGDSDGEKMANKELNNNNNKMNLIKTLMFITIVSCGADNIGLFVPYFISLTPLNLVITLIVFLIM
IFLLVFVAQKLANVPTIGEVLEKYSRWFIGFVYIFIGGSVLIENGSIQFIINLFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SERP2221 YP_189776.1 cadmium resistance family protein Not tested vSe1 Protein 5e-28 57
cadD YP_252014.1 cadmium binding protein CadD Not tested SCCmec Protein 5e-29 56
cadD YP_254238.1 cadmium binding protein CadD Not tested ¥ðSh1 Protein 4e-26 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadB YP_192958.1 cadmium resistance protein BAC0057 Protein 1e-29 59