Gene Information

Name : LBA1913 (LBA1913)
Accession : YP_194742.1
Strain : Lactobacillus acidophilus NCFM
Genome accession: NC_006814
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1923826 - 1924527 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTTATATAGAAATTAAAAATAATACCAAAACTTATCAATCGGGCAATACGACTATCTATGCTAATAAAGATATCTC
TTTTTCTGTAAATAAAGGCGAGTTAGTCATCATTCTTGGCTCATCGGGTGCTGGGAAGTCTACTTTGCTTAACATCCTTG
GAGGAATGGAACCTAATACCAGCGGAGACGTAATCGTAGCTGGTCAAAATATCGCAGGTTATAACGCCAAACAACTAACT
ACCTATCGTAGAAATGATATTGGTTTTGTCTTCCAGTTTTACAACTTAATTCCTAATCTAACTGCTAAAGAGAATGTGGA
ACTGGCTGCTCAAATTGTACCGAACGCAATGAGTGGTGACGAAGCTCTTAAACAAGTTGATTTAGCAAATCGTGCTAATA
ATTTTCCAGCTCAATTATCCGGTGGTGAACAGCAACGAGTAGCAATTGCCCGAGCCATTGCTAAAAAACCTGCTTTGCTT
TTATGTGACGAGCCAACAGGGGCATTAGATTATCAAACTGGTAAAAGAATTTTGAAGATTTTACAAAACATGAGTCGGAA
AAATGGTTCTACAGTTTTAATCGTTACCCATAACGCTGCTATCGCACCAATTGCTGATAAAGTTATTCGTATTCATGATG
GTAGTGTTAAAGATATTAAAATTAATAAAAAGCCTGCTGATATAAGTACAATTGAATGGTAG

Protein sequence : 
MAYIEIKNNTKTYQSGNTTIYANKDISFSVNKGELVIILGSSGAGKSTLLNILGGMEPNTSGDVIVAGQNIAGYNAKQLT
TYRRNDIGFVFQFYNLIPNLTAKENVELAAQIVPNAMSGDEALKQVDLANRANNFPAQLSGGEQQRVAIARAIAKKPALL
LCDEPTGALDYQTGKRILKILQNMSRKNGSTVLIVTHNAAIAPIADKVIRIHDGSVKDIKINKKPADISTIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBA1913 YP_194742.1 ABC transporter ATPase NC_012469.1.7685735. Protein 6e-77 67
LBA1913 YP_194742.1 ABC transporter ATPase CP001581.1.gene798.p Protein 6e-45 44
LBA1913 YP_194742.1 ABC transporter ATPase NC_012469.1.7686878. Protein 4e-39 43
LBA1913 YP_194742.1 ABC transporter ATPase CP001581.1.gene598.p Protein 1e-38 41