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Name : clpE (LBA1910) Accession : YP_194739.1 Strain : Lactobacillus acidophilus NCFM Genome accession: NC_006814 Putative virulence/resistance : Virulence Product : ATP-dependent protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1919088 - 1921217 bp Length : 2130 bp Strand : - Note : ClpE DNA sequence : ATGGCATACTTTGATAATGATTTTGACAATTTATTTAACGAATTAAATAGCTCATTCTTTAACGATGATTTTGGAAGCAG AAGAAGCGATAATAACGGCAATTCTGGTTCTATTCCTATGAACTACTCAAGTAACATGAGTTCTTCACCACGTACTATTC AACAAAATCCACAACAACCAAATGAAAAGCCAATTGGTGTAGATTTAGTTGAAGAAGCTAAGAACAACAAGTTTGACCCA GTTATTGGTCGTGATGAACAAATTGATAACGTAATTGAAATTTTATCAAGACGTAAGAAGAATAATCCTGTTTTAATTGG ACCTGCTGGTGTTGGTAAGACTTCTATCGTAGAAGGTTTGGCTGAAAGAATTGCCGCTGGTAATGTTCCAGCTAAGATGG CTAACATGCACATCATTTCAGTAAACATTAATGATATGGTTGCTGGCTCAAGTCTTCGTGGTAGCTTTGAAGAAAGATTA AAGAAAGTTATCGACAAGGCTAAGAGTGACCCTAACATTGTTTTATTCATTGATGAATTACACAACATTGTTGGTGCAGG TTCTACTGATTCTGAAAATAACAACGGTGACGCTGCTAACATTTTGAAACCAGCTCTTGCAAGCGGTGAATTAAAGTTAA TCGGTGCTACTACTACAAGTGAATTCCAAAGAATTGAAAAGGACCCAGCTCTTTCACGTAGATTCCAAGCTGTTCAAGTT CCAGAACCTTCAACTGATGTAGCTATCAAGATTTTGGAAGGCTTGAAGAAGAAATACGAAGACTACCACCACGTAAAATA CACTGATGACAGTCTTAAATTAGCTGTAGAATTATCAGAAAGATACATTCAAGGTCGTTACTTACCAGATAAAGCTATCG ATTTGATGGATGAAGCTGGTGCTAAGAAGGCTTTGCTTGTACAACCAACTGATGAAAAGAGTCTTAAGAACCAAATTAGT GCTCTTGAAGCTAAGAAGGCAGAAGCTGCTAAGGCAGAAGACTATGACAAGGCTGCTGAAATCAAAGAAAAGATTGCTAG CCTTGAATCACAATTAAAGAGCGTAGATAGCAAGAATACTCCAGAAGTAACTGCAAAAGATATCTACCAAATTATTGAAC AAAAGACTAAGATTCCTATGAGTGAACTTCACGCTGATGAAGCTCAAAAGAACTTAGACTTGGCTAAGAAATTAAAGAAG AACGTTATTGACCAAGATAGAGCAATTGACGTAATTACTGACGCTATCGCTCGTAAGCAAATCTTCAAAGACAGCGATCG TCCTACTGGTTCATTCTTACTTACTGGTCCTACAGGTGTTGGTAAGACTGAACTTGCTAAGCAATTAGCTATTCAATTAT TTGGTAACAAGGAACACTTAATCCGTTTGGATATGAGTGAATACCAAGATGAAATGGCAGTTAACAAGTTGATTGGTTCT GCACCAGGTTACGTAGGCTATGGTGAAGGTGGTCAATTAACTGAAAAAGTTCGTCACCAACCATACTCATTGATTTTGTT TGACGAAATTGAAAAGGCTAACCCACAAGTTTTCAACGCACTTCTTCAAATTATGGATGACGGTCGTTTGACTGATGCAC AAGGTAGAACTGTATCATTCAAGGATACTATCTTAATTATGACTTCAAACGCTGGATTCTCAGACAAGTTGCTTGAAGAC GGTAAAGTTGATCAAGACAAGTTAATCTCAGCTCTTGAAAACTACTTCAGACCTGAATTCTTAAACCGTTTGGACGCAAT CGTACCATTCAACTCACTTACTGAACAAGACATGGGTAAGATTATCAACATTTACTTGAAGAAGATGTCACATGTACTTG CTAAGAAGGGTGTAACTGTTGAAGTTTCAGATGAAGCTAAAGAATTCTTGGCAGAAAAAGGTTATGACAAGAAGTTCGGT GCTCGTCCACTTAGAAGAGTTGTTGAACAAAACCTTGAAACTCCAGCTGCTAAGTTAATCTTAAGAGAACCTGACACTAA GAAGATTGAATTCACTGCTGACGACAAGCACTTATACTTGAACGGCAAGGCAATCTTTGACATTTCTCCAAAGGTTGAAG AAAAAGTTAAGGAAGACGAAGCTAAAGCTGAAGGCAAAAAAGAAGACTAA Protein sequence : MAYFDNDFDNLFNELNSSFFNDDFGSRRSDNNGNSGSIPMNYSSNMSSSPRTIQQNPQQPNEKPIGVDLVEEAKNNKFDP VIGRDEQIDNVIEILSRRKKNNPVLIGPAGVGKTSIVEGLAERIAAGNVPAKMANMHIISVNINDMVAGSSLRGSFEERL KKVIDKAKSDPNIVLFIDELHNIVGAGSTDSENNNGDAANILKPALASGELKLIGATTTSEFQRIEKDPALSRRFQAVQV PEPSTDVAIKILEGLKKKYEDYHHVKYTDDSLKLAVELSERYIQGRYLPDKAIDLMDEAGAKKALLVQPTDEKSLKNQIS ALEAKKAEAAKAEDYDKAAEIKEKIASLESQLKSVDSKNTPEVTAKDIYQIIEQKTKIPMSELHADEAQKNLDLAKKLKK NVIDQDRAIDVITDAIARKQIFKDSDRPTGSFLLTGPTGVGKTELAKQLAIQLFGNKEHLIRLDMSEYQDEMAVNKLIGS APGYVGYGEGGQLTEKVRHQPYSLILFDEIEKANPQVFNALLQIMDDGRLTDAQGRTVSFKDTILIMTSNAGFSDKLLED GKVDQDKLISALENYFRPEFLNRLDAIVPFNSLTEQDMGKIINIYLKKMSHVLAKKGVTVEVSDEAKEFLAEKGYDKKFG ARPLRRVVEQNLETPAAKLILREPDTKKIEFTADDKHLYLNGKAIFDISPKVEEKVKEDEAKAEGKKED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-127 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_194739.1 | ATP-dependent protease | VFG0080 | Protein | 5e-146 | 52 |
| clpE | YP_194739.1 | ATP-dependent protease | VFG0079 | Protein | 4e-125 | 45 |
