Gene Information

Name : LBA1283 (LBA1283)
Accession : YP_194144.1
Strain : Lactobacillus acidophilus NCFM
Genome accession: NC_006814
Putative virulence/resistance : Virulence
Product : glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 1261749 - 1262681 bp
Length : 933 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAATTATCGATTGTGGTTCCTTGTTATAATGAAGAAGAATCAATTCCTCTCTTTTATAATGCAGTAGAAAAAGT
AATGCAGACTATTCTGGATTTAGACTATGAATATTGGTTTGTCAATGATGGTTCATCTGATAAATCGCTTGAAGAAATGA
GGCAACTTCAAAAAAATGATCCAGAACATGTCCATTATGTCTCGTTTTCACGTAATTTTGGTAAAGAAGCAGCACTTTAT
GCAGGCTTGCAGGCATCTATAGGAGATTATATAGTAGTGATGGATGTAGATTTGCAAGATCCACCTGAATTTTTGCCTGA
AATGTATAATTACATTAAAACCGGTAAGTATGATTGTATCGGAACGCGTCGTGTAGATAGAAAAGGTGAGGCTAAATTTA
AATCTTTTCTTTCAGACATGTTTTATAAATTAGTTAATAAAATTTCTAATACTGAAATTGTATCGGGTGCTCGTGATTAT
CGTATGATGACGCGGCAAATGGTTGATGCGGTTTTAAGTATGCCTGAGTATAATCGCTTTTCAAAAGGAATTTTTTCTTG
GGTAGGGTTCAAAACAAAATATTTAGACTATCATAACGTTGAAAGAGTAGCTGGTGAGAGTGATTGGAACACTTGGAAGC
TATTTAAATATGCAATGGATGGAATAGCTGACTTTTCACAAGCTCCGTTAAATATTGCAGTTTGGATAGGAACAACTTCA
TTTATTCTTTCTATTATTGGGTTAGTCTTTGTAATTGTGCGGCATTTTATAGATACCAACTCAAGTGTATTTGGTTGGGC
GTCAATGGTAAGTATTATTTTGCTTCTTGGCGGGCTTCAATTATTATGTATAGGCATATTAGGGAAATATTTAGGAAGAA
TATATTTACAAGTTAAAAATCGGCCGATATATATAATTAAGGAGAAAAAATAA

Protein sequence :
MKKLSIVVPCYNEEESIPLFYNAVEKVMQTILDLDYEYWFVNDGSSDKSLEEMRQLQKNDPEHVHYVSFSRNFGKEAALY
AGLQASIGDYIVVMDVDLQDPPEFLPEMYNYIKTGKYDCIGTRRVDRKGEAKFKSFLSDMFYKLVNKISNTEIVSGARDY
RMMTRQMVDAVLSMPEYNRFSKGIFSWVGFKTKYLDYHNVERVAGESDWNTWKLFKYAMDGIADFSQAPLNIAVWIGTTS
FILSIIGLVFVIVRHFIDTNSSVFGWASMVSIILLLGGLQLLCIGILGKYLGRIYLQVKNRPIYIIKEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 8e-40 42
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 3e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBA1283 YP_194144.1 glycosyl transferase VFG0670 Protein 2e-40 44