|
Name : SEA0018 (SEA0018) Accession : YP_187547.1 Strain : Genome accession: NC_006663 Putative virulence/resistance : Unknown Product : ABC transporter, ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 13801 - 14505 bp Length : 705 bp Strand : - Note : identified by match to protein family HMM PF00005 DNA sequence : ATGATAGAGGTAAAAAATGTAAGTAAATCCTTTGGTAAACAACAAGTGGTAGATGATATATCTATATCATTTAATGCTGG TGAGGTTGTGGGTCTAATCGGTCCTTCAGGTACTGGAAAAACGACATTAATACAGTGCATTTTAGGCATGGAGAAAATTG ATGGTGGGCAAGTCACTATTCAAGAACATACAATGCCGAATAGAAAGATATTATCAAATATTGGTTATATGGCTCAAAAT GATGCTTTATATAATGATTTAACTGGACGTGAAAATTTAACGTTTTTCGCAAGAATTTATATGCGTGATAAAGAAGATAT TAAAAAACGTGTGAACCTATGCAGTTCCATGGTTCAATTAGACAATGATTTAGATAAGAAAGTTGAAATGTATTCTGGTG GAATGAAACGACGCTTATCTTTAGCTATTAGCTTTTTACAAAATCCTAATATCCTTATATTAGACGAACCTACAGTTGGC ATTGATCCTAAATTGCGTCAGACGATTTGGAAGGATTTAACTAAAGCAAAGGCTGAAGATAAATGCATTATAGTGACAAC GCATGTATTAGATGAAGCTACACGCTGTGATAAGCTCGTATTAATGAATCAAGGAAAGATATTGGCAACGGGTACACCAG ATGAAGTGAAAAAACAATATCACACAGATACGATTGAAGGCGTATTTCTGAATATGGAGGGATAA Protein sequence : MIEVKNVSKSFGKQQVVDDISISFNAGEVVGLIGPSGTGKTTLIQCILGMEKIDGGQVTIQEHTMPNRKILSNIGYMAQN DALYNDLTGRENLTFFARIYMRDKEDIKKRVNLCSSMVQLDNDLDKKVEMYSGGMKRRLSLAISFLQNPNILILDEPTVG IDPKLRQTIWKDLTKAKAEDKCIIVTTHVLDEATRCDKLVLMNQGKILATGTPDEVKKQYHTDTIEGVFLNMEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0081 | YP_251996.1 | hypothetical protein | Not tested | SCCmec | Protein | 7e-46 | 53 |
| SE0094 | NP_763649.1 | ABC transporter ecsA-like protein | Not tested | SCCpbp4 | Protein | 9e-60 | 52 |
| SH2613 | YP_254528.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 6e-61 | 51 |
