Gene Information

Name : SEA0017 (SEA0017)
Accession : YP_187546.1
Strain :
Genome accession: NC_006663
Putative virulence/resistance : Unknown
Product : ABC transporter, permease protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0842
EC number : -
Position : 12669 - 13799 bp
Length : 1131 bp
Strand : -
Note : identified by similarity to OMNI:NTL01LL0262

DNA sequence :
ATGAATTCGTTGCACATAGCAGGACGTATTTTCAAACAGACGATTCGAGATGTAAGAACATTGGCACTGTTACTTATTGC
ACCTATATTACTATTGTCGCTACTATATTACATTTTTACAGTTGCCGATAATACGAATGGCGTAACAGTTGGGGTTCACG
ATGTACCAGATTCATTAATGACTGAATTACATGATAAAGATATTCACGTTAAACATTATAAAAATGACAATGATATAAGT
GATAAAATTAAAGACGACAAATTAACAGGATTTTTGCACAGTGATGGTCAAAAAGTATCAGTGACTTATGCTAACGATAA
TCCTACACAAGCAGGAGAACTAACAGGTGCAAATCAAAAATGGTTAATGAGTCATAACATGAATGCCATGAAAGATAATA
CTAATAAATTGCATCAAGCGTTAACTAAAATACAACAAAAAATGCCCGGGGATGGGGGAGACACGCCTCATCAAGATATG
GCTAAACCATATAAACTAACAACGCACTATTTATATGGTTCATCAGATTCTACGTATTTTGATATGATAAATCCTATTTT
AATTGGATTTTTTGTCTTTTTCTTTACGTTTTTAATTTCTGGCATTGGCTTATTAAAAGAGCGTACTTCTGGCACATTAG
AACGTTTACTTGCCTCTCCAATAAAAAGAAGTGAAATTATTTTTGGTTATGTTTTCGGTTATGGTAGTTTTAGCGTTATC
CAAACAATAGTTGTCGTATTATATGCAATTTATATTCTGCATATAGACTTAGTAGGTTCGATATGGTTCGTACTATTAAC
GGCAATATTAACAGCGCTTGTCGCTGTGACATTCGGTATATTATTATCTACCTTTGCTTCCTCAGAATTCCAAATGATTC
AATTTATACCATTAGTCATAGTGCCACAAGTACTATTTGCAGGCATTATACCAATTGAATCAATGAATAAAGGATTACAA
TACTTTTCACATATCATGCCGTTATTCTATACCGGCCAAACGATGCAAAATATTATGATCAAGGGTTATGGATTCAACGA
TATTTACATTTATTTAATTGTGTTATTCGCATTTTTCATTTTCTTATTGATTTTAAATATTATAGGCATGAAAAGATATA
GAAAAGTTTAG

Protein sequence :
MNSLHIAGRIFKQTIRDVRTLALLLIAPILLLSLLYYIFTVADNTNGVTVGVHDVPDSLMTELHDKDIHVKHYKNDNDIS
DKIKDDKLTGFLHSDGQKVSVTYANDNPTQAGELTGANQKWLMSHNMNAMKDNTNKLHQALTKIQQKMPGDGGDTPHQDM
AKPYKLTTHYLYGSSDSTYFDMINPILIGFFVFFFTFLISGIGLLKERTSGTLERLLASPIKRSEIIFGYVFGYGSFSVI
QTIVVVLYAIYILHIDLVGSIWFVLLTAILTALVAVTFGILLSTFASSEFQMIQFIPLVIVPQVLFAGIIPIESMNKGLQ
YFSHIMPLFYTGQTMQNIMIKGYGFNDIYIYLIVLFAFFIFLLILNIIGMKRYRKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0095 NP_763650.1 hypothetical protein Not tested SCCpbp4 Protein 3e-60 49
SH0082 YP_251997.1 hypothetical protein Not tested SCCmec Protein 3e-59 48
SH2614 YP_254529.1 hypothetical protein Not tested ¥ðSh2 Protein 1e-51 43