Gene Information

Name : pK2044_00860 (pK2044_00860)
Accession : YP_001688000.1
Strain :
Genome accession: NC_006625
Putative virulence/resistance : Unknown
Product : IS2 element protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 137577 - 138482 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence :
GTGGATAGCGCACGTGCCCTTGTTGCCGGAGGATGGCAAATAGGCCTCGTCAGTCGTTGCCTTCGGATCTCACGTGCGCA
ACTGCATGCCATAGTCAGTAGGTCGAAGAACTGGCAGGATCGCCGACGCAAGCGCAAGCCTGATGATACTGAAGCGCTGG
CCCGTATCCATACTGTTATCGGCGATCTGCCCACCTATGGTTATCGTCGGGTATGGGCACTGCTACGCAGACAATCAGAA
ACTGACGACATGGCGGTGATCAATGCCAAACGTGTATACCGCATCATGCGTCAGAATGCGCTGCTGCTTGAGCGTAAACC
GGAAATACCGCCCTCGAAGCGGGCGCATACAGGGAAAGTGGCCGTTGGAGAAAGTAACCAGCGGTGGTGCTCTGACGGCT
TCGGGTTCAGCTGTGATAACGGTGAAAAACTGCGGGTCACGTTCGCTCTGGACTGTTGCGATCGCGAGGCACTTTACTGG
GCGGCCAGTAACGGTGGATATGACAGTGAAACCGTGCAGGACGTCATGCTGGGTGCCGTGGAGCGTCGTTTCGGTAACAG
CCTGCCGACATCCCCCGTTGAGTGGCTGACAGACAACGGTTCAGCCTACCGTTCTTATCAGACGCGTCAGTTCGCCAGAA
TGGTAGGACTGGAGCCTAAACATACGGCGGTACGTAGCCCGGAAAGCAACGGTATGGCAGAGAGCTTCGTGAAAACGATG
AAGCGCGATTACATCAGCATCATGCCGAAACCCGACGGGTTAACAGCGGTAAAGAACCTTGCGGAGGCCTTCGAACATTA
CAACGAATGGCATCCGCATAGTGCGCTGGGGTATCGTTCGCCACGGGAATATCTGCGGCGGCGAACCAGTAATGGGTTAA
GTGATAAAAAGGGTATGGAAATATAG

Protein sequence :
MDSARALVAGGWQIGLVSRCLRISRAQLHAIVSRSKNWQDRRRKRKPDDTEALARIHTVIGDLPTYGYRRVWALLRRQSE
TDDMAVINAKRVYRIMRQNALLLERKPEIPPSKRAHTGKVAVGESNQRWCSDGFGFSCDNGEKLRVTFALDCCDREALYW
AASNGGYDSETVQDVMLGAVERRFGNSLPTSPVEWLTDNGSAYRSYQTRQFARMVGLEPKHTAVRSPESNGMAESFVKTM
KRDYISIMPKPDGLTAVKNLAEAFEHYNEWHPHSALGYRSPREYLRRRTSNGLSDKKGMEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 2e-134 96
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 2e-104 83
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 4e-105 83
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 1e-105 83
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 4e-105 83
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 1e-118 81
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 5e-119 81
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 9e-120 81
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 9e-120 81
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 9e-120 81
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 4e-120 81
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 2e-105 79
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 4e-84 64
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 7e-61 61
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 2e-64 61
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 3e-64 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pK2044_00860 YP_001688000.1 IS2 element protein VFG0649 Protein 2e-105 83
pK2044_00860 YP_001688000.1 IS2 element protein VFG0608 Protein 4e-120 81
pK2044_00860 YP_001688000.1 IS2 element protein VFG1732 Protein 6e-119 81
pK2044_00860 YP_001688000.1 IS2 element protein VFG0621 Protein 4e-120 81