Gene Information

Name : pK2044_00840 (pK2044_00840)
Accession : YP_001687996.1
Strain :
Genome accession: NC_006625
Putative virulence/resistance : Unknown
Product : IS66 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 134410 - 136002 bp
Length : 1593 bp
Strand : +
Note : -

DNA sequence :
ATGAATCACGACTATCTCGCCCGTATCGCTGCGCTGGAAGACGCGCTTCGCCAGAAAGACAGTCAGCTCAGTCTCGTTGC
AGAGACTGAGTCGTTCCTGCGTTCTGCACTGGCCCGCGCAGAAGAGAAAATAGAGAACGAAGAGCGCGAGATAGAGCATC
TGCGGGCACAGATAGAAAAACTGCGTCGAATGTTGTTCGGTACCCGCTCCGAAAAACTTCGCCGACAGGTTGAAGAAGCC
GAAGCCCTGCTGAAACAGCAGGAGCAGCAAAGCGATCGCTACAACGGACGGGAAGACGATCCGCAGGTACCTCGCCAGTT
ACGTCAGTCCCGCCATCGTCGCCCGTTACCGGCACACCTTCCCCGCGAGATACATCGGCTGGATCCTGCGGAAACCAGCT
GTCCGGAATGCGGCAGCGGTATGGCGTACCTCAGCGAAGTCAGCGTGGAGCAGCTGGAACTGGTCTCCAGCGCCCTGAAA
GTGATCCGCACGGTCAGGGTGAAAAAGGCCTGCACCCGATGTGACTGTATCGTTGAAGCACCTGCGCCATCACGTCCCAT
CGATCGGGGTATCGCCGGGCCGGGTCTGCTGGCCCGCGTGTTAACGGCCAAATACTGCGAACACCTGCCGCTGTATCGCC
AGTGCGAAATCTTTGCCCGTCAGGGCGTGGATCTGAGCCGGGCTCTGCTCTCCAACTGGGTGGATGCCTGTTGCCGGTTA
ATGGCCCCGCTGGATGAGGCCCTTTACCACTACGTGATGGACTGCCACAAACTGCATACGGATGACACTCCGGTTCCGGT
GCTTGCACCGGGCAGAAAGAAGACGAAAACCGGGCGTATCTGGACGTATGTACGTGACGACAGAAGCGCAGGTTCATCAG
ATCCGCCAGCGGCATGGTTCGCCTTCTCGCCAGACCGGCAGGGAAAACATCCTCAGCAACACCTTCGCCACTATCATGGT
GTGCTGCAGGCGGATGCCTTCGCAGGCTACGATCGGTTGTTCAGTCCGGAACGTGAAGGAGGGCCGCTGACAGAAGCCGC
ATGTTGGGCCCATGCCCGCCGAAAAATCCATGATGTCTATATAAGCACTCACACAGCGACAGCAGAAGAAGCCCTGAAAC
GTATCGGTGAGCTGTACGCGATAGAAGAAGAAATACGCGGCCTCACGACAGAAGAGCGTCTGGCAGCCAGACAATCGCAA
AGCAAACCACTGCTGGCATCGCTGCATGAATGGCTGGTAGAAAAAAATGAGACGCTGTCGAAAAAGTCCCGTCTGGGCGA
AGCGTTCGCTTATGTCCTGAACCAGTGGGATGCGCTGTGCTACTACTGTGAAGATGGCCTGGCAGAGCCTGATAACAACG
CTGCCGAACGAGCCCTTCGTGCCGTCTGTCTTGGGAAAAAGAATTTTATCTTCTTCGGCAGCGACCACGGTGGTGAGCGC
GGAGCCCTGCTGTACGGACTGATCGGGACGTGCAGGCTGAATGGTATCGATCCGGAAGCCTACCTTCGCCATATCCTGAG
CGTACTGCCGGAGTGGCCCAGCAACAAAGTGGCCGAACTGCTGCCATGGAACGTGGTTCTTACCGATAAATAA

Protein sequence :
MNHDYLARIAALEDALRQKDSQLSLVAETESFLRSALARAEEKIENEEREIEHLRAQIEKLRRMLFGTRSEKLRRQVEEA
EALLKQQEQQSDRYNGREDDPQVPRQLRQSRHRRPLPAHLPREIHRLDPAETSCPECGSGMAYLSEVSVEQLELVSSALK
VIRTVRVKKACTRCDCIVEAPAPSRPIDRGIAGPGLLARVLTAKYCEHLPLYRQCEIFARQGVDLSRALLSNWVDACCRL
MAPLDEALYHYVMDCHKLHTDDTPVPVLAPGRKKTKTGRIWTYVRDDRSAGSSDPPAAWFAFSPDRQGKHPQQHLRHYHG
VLQADAFAGYDRLFSPEREGGPLTEAACWAHARRKIHDVYISTHTATAEEALKRIGELYAIEEEIRGLTTEERLAARQSQ
SKPLLASLHEWLVEKNETLSKKSRLGEAFAYVLNQWDALCYYCEDGLAEPDNNAAERALRAVCLGKKNFIFFGSDHGGER
GALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNKVAELLPWNVVLTDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 0.0 85
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 0.0 84
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 0.0 84
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 7e-133 75
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-129 69
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-142 65
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 7e-148 65
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-148 65
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-148 65
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-148 65
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-147 65
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 7e-148 65
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 7e-148 65
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-148 65
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 3e-148 65
unnamed AAL57570.1 unknown Not tested LEE Protein 7e-149 65
tnp AEA34686.1 transposase Not tested Not named Protein 8e-148 64
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 3e-113 55
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 1e-108 52
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 3e-98 51
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 2e-98 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pK2044_00840 YP_001687996.1 IS66 family transposase VFG1736 Protein 3e-162 80
pK2044_00840 YP_001687996.1 IS66 family transposase VFG1700 Protein 8e-130 69
pK2044_00840 YP_001687996.1 IS66 family transposase VFG0793 Protein 8e-149 65