Gene Information

Name : TK0424 (TK0424)
Accession : YP_182837.1
Strain : Thermococcus kodakaraensis KOD1
Genome accession: NC_006624
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 350543 - 351604 bp
Length : 1062 bp
Strand : +
Note : Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminas/5-amino-6-(5-phosphoribosylamino)uracil reductase

DNA sequence :
ATGAGGGACGAAGACGAGAAGTTCATGAGGCTCGCCCTCGAGCTGGCGAAGCGCGGAGAAGGTTGGACAAACCCGAACCC
GATGGTAGGGGCGGTTATAGTCAAGGATGGGAAGATAATAGGCGTGGGCTGGCACAGGAAGTTCGGCGAGAAGCACGCCG
AGATAAACGCCATAGAGGATGCAAAGGCAAAGGGTTACGACGTTAGAGGGGCCACGATGTACGTAACGCTCGAACCCTGC
TCCCACTGGGGGAAGCAGCCGCCCTGCGCGGATAGAATAATCCAAGAGGGCTTTAAAAGGGTTGTCGTGGCCATGGAGGA
CCCAAACCCGCTTGTTGCTGGCCAAGGAATAGAGAAGATGAGAAAGGCTGGAATAGAAGTAGAAGTTGGTCTTCTGGAGG
AGGAAGCGAGGAAGCTCAATGAAATCTTCCTCAAATACATCACAACTAAACTCCCCTTCGTCTCGATAAAACTCGCCCTC
ACGCTCGACGGCTTCATAGCCACTGAAACTGGTTCCTCAAAGTGGATAACTGGTGAAAAAGCCCGCCAGAGGGTTCAGGA
GCTCAGAAGAAAGCATATGGCGATAATGGTCGGTTCTGGGACGGTTTTAGCTGACAACCCGAGGCTCAACTGCAGGCTTG
AGAACTGTCCCGAGAAGGTTAAGGTTATCCTCGACCGCTCCGGCAGGGTGGCAGATGAGATGAGAAAGGGACGGAAGTTC
CGCCTCTTCGAGGACGGAAGGGTTATCTTCTTCACGGAAAAGCCGGAGAAGTTCAAGGGAATAGCAGAGGCATACCCGAT
AACCGAGCCAGCCAAGATCCTGAAGAAGCTCGGCGAGCTGGGGATAGACAGTGTCCTGGTCGAGGGCGGCAGAATAGCCT
GCCAGTTCCTGTCCCTGGCCGACAAGTTATACCTCTTCTACGGGCCAAAGCTCTTCGGGAGAGGGATAAAGCCCTTCGAG
TGCCTCAAGGTCGAGAACACCAAGGAGGCTCCCCTGCTGAGAATTGAGTCGATCGAGAGGCTCGGCGAGAGCTTCCTCGT
TACCGCTTACCCAGGGTGGTGA

Protein sequence :
MRDEDEKFMRLALELAKRGEGWTNPNPMVGAVIVKDGKIIGVGWHRKFGEKHAEINAIEDAKAKGYDVRGATMYVTLEPC
SHWGKQPPCADRIIQEGFKRVVVAMEDPNPLVAGQGIEKMRKAGIEVEVGLLEEEARKLNEIFLKYITTKLPFVSIKLAL
TLDGFIATETGSSKWITGEKARQRVQELRRKHMAIMVGSGTVLADNPRLNCRLENCPEKVKVILDRSGRVADEMRKGRKF
RLFEDGRVIFFTEKPEKFKGIAEAYPITEPAKILKKLGELGIDSVLVEGGRIACQFLSLADKLYLFYGPKLFGRGIKPFE
CLKVENTKEAPLLRIESIERLGESFLVTAYPGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-33 41
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-33 41