Gene Information

Name : ABC0836 (ABC0836)
Accession : YP_174336.1
Strain : Bacillus clausii KSM-K16
Genome accession: NC_006582
Putative virulence/resistance : Resistance
Product : arsenic efflux pump
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 904683 - 905981 bp
Length : 1299 bp
Strand : +
Note : -

DNA sequence :
TTGTTATCGGTTCTTTTCGCTTCATTGATTTTTATTACGACGCTCGCGTTGGTTATTTGGCAGCCTCGTAACTTGAATAT
TGGTTGGTCAGCGTGTGGGGGAGCTATTCTCGCTTTATTATTTGGCGTTGTTTCATTTGCCGATGTGGTGGAAGTGACGG
GGATCGTGTGGAACGCCACGTTGACGTTTATTGCAATTATTATTATTTCTTTAATCCTTGATGAGATTGGTTTCTTTGAA
TGGGCCGCCTTACATATGACCAAGGCAGCGAAGGGAAATGCCAAGCTGATGTTTGTATATGTGTGCATTCTTGGTTCCGT
AGTTGCGGCGTTTTTTGCCAATGATGGCGCTGCCTTGATTTTAACGCCAATCGTTTTAGCGATGGTGCGTGCTTTACACT
TTAATGAAAACATGGTGTTCCCTTTTATCATGGCCAGTGGGTTTATCGCGGACTCAACGTCGCTGCCGCTCATTGTAAGT
AACTTAGTGAACATTGTTTCGGCTGATTTTTTTGGGATTGGCTTCATTGAATATGCAACACGGATGATTGTTCCGAATGT
CTTCTCTTTAATCGCGAGTATCCTTGTGCTGTATCTCTACTTCCGAACAAGCATCCCGAACAACTATGATTACGAGACGT
TGCAACCACCTGCATCGGCAATTAAAGATAATAACATGTTCCGCTTGTCTTGGTGGGTGCTTGTTCTATTGTTAATGGGT
TACTTAGTCAGTGAGTTTTTGCATATTCCCGTTTCTATGATTGCAGGACTGATTGCGTTGCTCTTTATAGTGATAGCTAG
AAAAAGCCCTGCTGTTCAAACCCGATCTATATTAAAAGGCGCGCCATGGAACATAGTTTTTTTCTCGATTGGGATGTATG
TTGTCGTGTTCGGTTTACAAAATGTCGGTTTAACGGATTTGCTCGCTTGGGGACTTGAGAGGATCGCGGAGCAAGGTGTC
TTTGCTGCTATGATGGCGATGGGGTTTGTTGCCGCTGTTTTAAGTTCGATGATGAACAACATGCCAACAGTAATGATTAA
TGCGATTGCCATTGATACGACAAGCGCGACTGGATTAATGAAGGAAGCGATGGTTTACGCAAATGTGATTGGTTCTGATT
TAGGGCCAAAAATAACACCTATTGGTTCGCTTGCCACATTATTGTGGCTCCATGTGTTAACACAAAAAGGTGTAAAAATC
TCATGGGGCACTTATTTTAAGACTGGTATAGTTATTACACTGCCTGTGTTATTTATAACGTTATTAGGTTTATACCTCTG
GTTAATCATCATTCATTAA

Protein sequence :
MLSVLFASLIFITTLALVIWQPRNLNIGWSACGGAILALLFGVVSFADVVEVTGIVWNATLTFIAIIIISLILDEIGFFE
WAALHMTKAAKGNAKLMFVYVCILGSVVAAFFANDGAALILTPIVLAMVRALHFNENMVFPFIMASGFIADSTSLPLIVS
NLVNIVSADFFGIGFIEYATRMIVPNVFSLIASILVLYLYFRTSIPNNYDYETLQPPASAIKDNNMFRLSWWVLVLLLMG
YLVSEFLHIPVSMIAGLIALLFIVIARKSPAVQTRSILKGAPWNIVFFSIGMYVVVFGLQNVGLTDLLAWGLERIAEQGV
FAAMMAMGFVAAVLSSMMNNMPTVMINAIAIDTTSATGLMKEAMVYANVIGSDLGPKITPIGSLATLLWLHVLTQKGVKI
SWGTYFKTGIVITLPVLFITLLGLYLWLIIIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-122 71
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 6e-126 70
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 3e-120 70
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-102 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABC0836 YP_174336.1 arsenic efflux pump BAC0574 Protein 2e-124 72
ABC0836 YP_174336.1 arsenic efflux pump BAC0575 Protein 3e-128 72
ABC0836 YP_174336.1 arsenic efflux pump BAC0578 Protein 1e-102 60
ABC0836 YP_174336.1 arsenic efflux pump BAC0576 Protein 5e-103 60
ABC0836 YP_174336.1 arsenic efflux pump BAC0031 Protein 4e-99 59
ABC0836 YP_174336.1 arsenic efflux pump BAC0577 Protein 5e-100 59