Gene Information

Name : ABC0508 (ABC0508)
Accession : YP_174009.1
Strain : Bacillus clausii KSM-K16
Genome accession: NC_006582
Putative virulence/resistance : Virulence
Product : UDP-glucose 4-epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : 5.1.3.2
Position : 559300 - 560232 bp
Length : 933 bp
Strand : -
Note : Vi polysaccharide biosynthesis

DNA sequence : 
GTGGCAACTTACCTAATTACAGGGGGAGCTGGCTTTATTGGCTCTAATATTGCTAAAGCACTTGTGGCAAAGGGAGAGAA
AGTCAAAATTTTAGACAATTTTAATACAGGAAAAAAAGACAACATCGCTGAATTTATTGATGACGTGGAAGTCATCGACG
GGGACTTTACAAACGAGAAAACGGTCCAATCTGCGTTAAAGCAGGTTGATGTTGTTTTTCATCAAGGAGCGATTCCGTCT
GTGCCGAAATCGATTCAAAACCCGATTGAATCGAACCATGCCAATGTCTCTGGTACGCTTCAGCTCTTGCAAGGTGCGGT
TGAAGCAAGAGTAAGTCGATTTATTTATGCGGCATCGTCATCCGCTTATGGGGACTCGGAAACATTGCCTAAACATGAAC
AATTGCCTGGCAACCCTATGTCCCCCTATGCGGTCAGCAAATACACAGGCGAGCTTTATTGTAAAGTTTTCTATAACCTT
TATGGTTTGGAAACCGTTTCGCTTCGCTACTTTAATGTCTTTGGCCCTCGTCAAGACCCCAATTCCAAATATGCAGCCGT
TATCCCAAGCTTTATAAAGGCAATGCTAAACGACAAACCACCGACTATTTTTGGCGACGGCACACAATCACGTGACTTTA
CGTTTATTGACAATGTCGTTGCTGCCAATTTATTAGCAGCCAATGCCCCTAAACTACAAGGAGAATCGGTAAACATAGGG
GGAGGAGCCAGCATTGACCTCAACTCCCTGGTAGATGAAATCAATGTACTCTTAGGCAAACAAATTCAGGCAAATTATGG
GTCTGAACGGCCAGGGGACGTAAAACATTCCCTTGCCGATATCCACCTTGCCGAAAAGCTCATTGCCTACCGCCCTACCG
TTTCATTTCAGGAAGGATTAAGACAGACTGTCGAGTGGTTTAAACACCACTGA

Protein sequence : 
MATYLITGGAGFIGSNIAKALVAKGEKVKILDNFNTGKKDNIAEFIDDVEVIDGDFTNEKTVQSALKQVDVVFHQGAIPS
VPKSIQNPIESNHANVSGTLQLLQGAVEARVSRFIYAASSSAYGDSETLPKHEQLPGNPMSPYAVSKYTGELYCKVFYNL
YGLETVSLRYFNVFGPRQDPNSKYAAVIPSFIKAMLNDKPPTIFGDGTQSRDFTFIDNVVAANLLAANAPKLQGESVNIG
GGASIDLNSLVDEINVLLGKQIQANYGSERPGDVKHSLADIHLAEKLIAYRPTVSFQEGLRQTVEWFKHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 6e-49 45
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 6e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABC0508 YP_174009.1 UDP-glucose 4-epimerase VFG0430 Protein 3e-49 45