Gene Information

Name : ABC3420 (ABC3420)
Accession : YP_176914.1
Strain : Bacillus clausii KSM-K16
Genome accession: NC_006582
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophore ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3546900 - 3547670 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence : 
ATGGACATTCGTAATTTATCGTTTTCTTATCGTCATCATGAAAAGACAATCAATCACATTAATGCCGCGATCCGCCCAGG
GACTATTACTACAATCATTGGCCCCAATGGCTCTGGAAAGTCGACATTGCTCTCCTTGCTAGCAAATCGCCTGACTCCTA
TAAAAGGCGAAGTCGTAGTAGACGGCAAGACGCTTTCTTCTTACCGGGCGAAAGAATTGGCTCGACATTTGGCGGTTGTC
TACCAGCAAAATGAAGCACCGGCTGACATTACAGTCAAAAAATTAGTCGCGTATGGGCGCTTTCCTTATCGGAAACGATT
TTCCAACTGGAAAGAAGAGGACGAGCTTGCGGTAAATGAAGCGCTTGAAGCGACTAAATTAGAAAACAAGGCCCATTTGC
CGTTGTTGTCTCTTTCTGGAGGCGAGCAACAGCGCGCTTGGATTGCGTTAGCGCTTGCACAAAAAACAAACATCCTGCTT
TTAGACGAACCGACTACGTACCTTGATTTGTACCATCAGTTAGAAGTATTGGAACTTGTGCGCTCACTAAATCGGTTAAA
AAAGACAACAATTGTGATGGTGCTCCATGATTTAAACCAAGCCATTCAATACAGCGATGAGCTCATCGTTATGCAGGCAG
GAAGCATTGTCAAAGCTGGCTTGCCAAGAGAAGTGGTGACGGAAGAAATGGTAGAAAACATTTATGGCGTTCGTGCTGTT
TTGCGCGATGACGCGGAAGCGGGCCTCGTATTGTTGCCAGTTGGTATTTAG

Protein sequence : 
MDIRNLSFSYRHHEKTINHINAAIRPGTITTIIGPNGSGKSTLLSLLANRLTPIKGEVVVDGKTLSSYRAKELARHLAVV
YQQNEAPADITVKKLVAYGRFPYRKRFSNWKEEDELAVNEALEATKLENKAHLPLLSLSGGEQQRAWIALALAQKTNILL
LDEPTTYLDLYHQLEVLELVRSLNRLKKTTIVMVLHDLNQAIQYSDELIVMQAGSIVKAGLPREVVTEEMVENIYGVRAV
LRDDAEAGLVLLPVGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-44 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-44 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-44 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-43 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-43 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-41 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-43 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 5e-33 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABC3420 YP_176914.1 cobalamin/Fe3+-siderophore ABC transporter ATP-binding protein BAC0164 Protein 8e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABC3420 YP_176914.1 cobalamin/Fe3+-siderophore ABC transporter ATP-binding protein VFG0925 Protein 5e-48 47
ABC3420 YP_176914.1 cobalamin/Fe3+-siderophore ABC transporter ATP-binding protein VFG1042 Protein 8e-37 41