Gene Information

Name : ABC0299 (ABC0299)
Accession : YP_173802.1
Strain : Bacillus clausii KSM-K16
Genome accession: NC_006582
Putative virulence/resistance : Virulence
Product : C4-dicarboxylate transport system permease large protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 327477 - 328778 bp
Length : 1302 bp
Strand : -
Note : -

DNA sequence :
ATGGCTCTCCTTGCAGGTATTAGTTTAATTGTCGTGTTTTTAGGATTGCTTTTACTAGGCGTGCCAATCGCCATCAGTGT
TGCAGGTGCATCCATTGTCACGATGTTTCTGATCGCCCCTTTTGATGTCGCGATCTTTACATCTGCACAAAAGATGGTGA
CAGGCATTGACAGCTTTACACTGTTAGCGGTTCCATTCTTTTTGTTGACAGGCATTATCATGAACCAAGGAGGCATCGCT
CTCCGGCTTGTCAATGTAGCAAAACTATTTACAGGCAAATTGCCAGGTTCCCTTGCCCATACGAACATTGTCGGAAACAT
GCTTTTTGGATCGATTGCCGGCTCTTCCGTCGCTTCGGCTGCGGCAATCGGCAAAGTCATGAACCCATTGCAGGAAAAAG
AAGGGTATGACCGGAAATTTTCAGCCGCAGTCAACATTGCCTCCGCCCCAACTGGATTGATTATTCCTCCAACAGGGTTG
TTTATTATCTATTCCCTCGTTAGCGGTGGAACGTCAGTGGCGGCCCTTTTCCTTGCTGGTTATTTACCTGGTATCCTTTG
GGGTCTTGCTACACTGGTTGTCGCTTTTTTTATTGCTAAAAAGAAAGGCTACACAACATCGTCGGCTACAAAGGTTGAAT
CTCCCTTAAAAGTTATCTGGGAAGCGATCCCTAGCTTGTTTTTAGTCATTATTATCATTGGTGGCATTATCGGCGGTCTA
TTTACAGCAACCGAAGCGTCAGCAGTCGCGATTGTGTACGCGTTGCTTCTGTCTTTTGCCTACAAAAGCCTAACGTTGCG
GCAGTTGCCAGGCATTTTTAAAGAAGCTGTTGAACTAACCGTCGTCATCATGTTCCTAATTGGGACATCGGCCATGCTTT
CCCTAGTCATGTCATTTACTGGCATTCCGAGCGCCATTAGCTCCGCGATTTTAGCTTTGACGGATAACCCTATTCTTATC
TTGCTGTTGATCAATGTGATTTTGTTACTAATCGGCATTGTCATGGACGTCACACCGGCGATCTTGATCTTTACGCCCAT
CTTTTTACCAGTCGTGATGGAGTTTGGCATGGACCCAGTCCATTTTGGCGTCATTTTAATCGTCAACCTTTGCATTGGCA
ACATTACTCCACCAGGAGGAAGCGCTTTATTTGTTGGCAGTACCATCGGCAAAGTCAAAATTGAAGAAGTCATCCGCCCT
TTGCTTCCATTTTACGGCGCGGTCATTGTCGTTTTAATGCTCGTAACCATGTTTCCTTTTTTAAGCACGTGGCTGCCAAC
TCTAGCGGGATTAATGGAATAA

Protein sequence :
MALLAGISLIVVFLGLLLLGVPIAISVAGASIVTMFLIAPFDVAIFTSAQKMVTGIDSFTLLAVPFFLLTGIIMNQGGIA
LRLVNVAKLFTGKLPGSLAHTNIVGNMLFGSIAGSSVASAAAIGKVMNPLQEKEGYDRKFSAAVNIASAPTGLIIPPTGL
FIIYSLVSGGTSVAALFLAGYLPGILWGLATLVVAFFIAKKKGYTTSSATKVESPLKVIWEAIPSLFLVIIIIGGIIGGL
FTATEASAVAIVYALLLSFAYKSLTLRQLPGIFKEAVELTVVIMFLIGTSAMLSLVMSFTGIPSAISSAILALTDNPILI
LLLINVILLLIGIVMDVTPAILIFTPIFLPVVMEFGMDPVHFGVILIVNLCIGNITPPGGSALFVGSTIGKVKIEEVIRP
LLPFYGAVIVVLMLVTMFPFLSTWLPTLAGLME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 3e-40 41
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 3e-40 41
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 2e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABC0299 YP_173802.1 C4-dicarboxylate transport system permease large protein VFG1110 Protein 1e-40 41