Gene Information

Name : rph (ABC2652)
Accession : YP_176148.1
Strain : Bacillus clausii KSM-K16
Genome accession: NC_006582
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2782931 - 2783683 bp
Length : 753 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGCCAAGACGGCCGAAAACAAAATCAACTAAGAGAGGTTGAGATCATTCCTCATTTTACAAAGCATGCCGAAGGGTC
TGTACTGATTTCTGTTGGCGATACAAAAGTGATATGCACAGCAAGCATTGAAAACCGCGTCCCCCCGTTTTTACGTGGGC
AAAATAAAGGGTGGCTAGCGGCGGAATATTCGATGCTGCCACGAGCGACAGGCCAGCGAACGATTCGCGAAGCCGCAAAA
GGCAAATTGAGCGGGCGTACAATGGAAATCCAACGCCTGATCGGCCGGGCTCTCCGGGCAGTTGTCGATTTAGAAAAGCT
CGGTGAAAAGACGATTTGGATCGACTGCGACGTTATCCAAGCAGATGGCGGTACTCGAACCGCATCGATTACAGGTGCCT
ATGTGGCGCTTGTGCTCGCAGTTCAAAAAGCGTTCGCTGAAAAAACAATTAGCGCTTGGCCGATTACTGATTTTCTAGCA
GCTATATCTGTCGGCATTTTGCCTGAAGAAGGGGCGGTGTGTGATCTGTGTTACAGCGAGGATTCGCAGGCAAAGGTCGA
TATGAATATCGTCCAAACAGGTTCAGGCGATTTTGTTGAAGTGCAGGGCAGTGGAGAAGAAGCTGTTTATACACGCAGTG
AATTGAATGAGCTCCTTGACCTCGCTGCAGAGGGCATTGACCAATTGATTCACATCCAACGCCCGTTTCTTGGCGAGGCA
GCTAGTTGGATTGAAGAAAAAAAGGGGACATGA

Protein sequence :
MRQDGRKQNQLREVEIIPHFTKHAEGSVLISVGDTKVICTASIENRVPPFLRGQNKGWLAAEYSMLPRATGQRTIREAAK
GKLSGRTMEIQRLIGRALRAVVDLEKLGEKTIWIDCDVIQADGGTRTASITGAYVALVLAVQKAFAEKTISAWPITDFLA
AISVGILPEEGAVCDLCYSEDSQAKVDMNIVQTGSGDFVEVQGSGEEAVYTRSELNELLDLAAEGIDQLIHIQRPFLGEA
ASWIEEKKGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-57 55