Gene Information

Name : lspA (ABC2340)
Accession : YP_175836.1
Strain : Bacillus clausii KSM-K16
Genome accession: NC_006582
Putative virulence/resistance : Virulence
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 2469100 - 2469555 bp
Length : 456 bp
Strand : -
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
ATGGCATACATAGTGGCACTGATCATTATCGCACTAGACCAGTTAACGAAGTGGCTAGTCGTAACTTCTATGGAGTTGGG
CGAACGAATCCCGATTATTGATCAAGTCCTTTACCTATATTCTCATCGCAATACAGGAGCCGCTTTCGGCATTTTGCAAG
GCCAAATGTGGTTCTTTTACGTCGTTACCACCATCATTGTTGGTGTGATCATTTATCTCATCCAAACAGAAGCAAAAGGC
AACCGCTTGTTAAAAATCGCTCTCGGACTTGTGCTAGGAGGGGCGATTGGCAATTTCATTGACCGCCTTTTACGGCAAGA
AGTCGTCGATTTTATCGATACATTTGGCGATTTCCCGATTTTTAATATCGCTGATTCAGCCTTGACCATTGGCGTCGGCC
TTTTTTTACTAAACATATTGATTCAAGGGCGCAATGAAAAAAGGAGCACACGATAA

Protein sequence :
MAYIVALIIIALDQLTKWLVVTSMELGERIPIIDQVLYLYSHRNTGAAFGILQGQMWFFYVVTTIIVGVIIYLIQTEAKG
NRLLKIALGLVLGGAIGNFIDRLLRQEVVDFIDTFGDFPIFNIADSALTIGVGLFLLNILIQGRNEKRSTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0072 NP_763627.1 lipoprotein signal peptidase Not tested SCCpbp4 Protein 3e-14 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lspA YP_175836.1 lipoprotein signal peptidase VFG2161 Protein 6e-25 55