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Name : clpC (ABC0121) Accession : YP_173625.1 Strain : Bacillus clausii KSM-K16 Genome accession: NC_006582 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 151164 - 153620 bp Length : 2457 bp Strand : + Note : - DNA sequence : ATGATTTTTGGACGGTTTACTGAACGAGCCCAGAAAGTATTAGCGCTATCGCAAGAAGAGGCAATTCGTTTAAGCCACCA TAATATTGGCACTGAACATATATTGCTCGGACTAATCCGTGAGGGTGAAGGAATTGCAGCGAAAGCTTTGCAACAGCTTG GACTTGGTTCCGAAAAATTGCAAAAAGAAGTAGAAACCCTAGTGGGAAAAGGGCAAGAAGGGCAAAAAAGCATTCATAGC ACGCCTCATTATACGCCAAGAGCAAAGAAAGTAATTGAGCTGTCTATGGATGAAGCAAGAAAGCTTGGCCATTCATACGT TGGAACCGAACATATATTGCTTGGCCTCATCCGCGAAGGAGAAGGCGTAGCAGCACGAGTCCTTAATAATTTAGGGGTCA GCTTAAATAAAGCGAGACAACAAGTATTGCAGTTGCTTGGAAGCAATGAAGGAGGAAGCTCGTCACAATCAAACGGTGCG GCAACTAATGCCAATACGCCGACATTGGATAGCCTTGCCCGTGATTTAACAGCGATTGCTAGGGAGGAAACGCTTGATCC GGTTATTGGACGTAGCCGTGAAATAGAGCGAGTTATTCAAGTGCTTAGCCGCCGTACGAAAAACAACCCAGTATTAATTG GAGAGCCCGGTGTCGGAAAAACGGCAATTGCCGAAGGGCTGGCCCAAAGCATTGTTGCCAATGAAGTCCCAGAAACATTG CGCAATAAGCGAGTGATGACACTCGACATGGGCACTGTTGTCGCTGGAACAAAATACCGCGGCGAATTCGAAGATCGGCT GAAAAAAGTGATGGACGAAATTCGCCAAGCAGGCAACGTGATTCTGTTTATTGACGAATTGCATACATTAATTGGCGCAG GAGGCGCTGAAGGAGCCATTGATGCTTCTAATATTTTGAAACCGTCTTTGGCTAGAGGGGAACTTCAATGTATTGGCGCG ACGACACTAGATGAGTACCGCAAGTATATTGAAAAAGACGCGGCATTGGAACGCCGGTTCCAACCCATTCAAGTTGACGA GCCAACGATTGATGAATCGATCCAAATCCTTTATGGTTTGCGTGATCGCTATGAAGCCCATCACCGAGTGACCATTACGG ACGAGGCGGTGGAAGAAGCAGTAAAGTTGTCCGACCGTTATATTTCGGACCGGTTTTTGCCAGATAAAGCGATTGACTTA ATTGATGAAGCAGCTTCAAAAGTCCGCCTCCGTTCTTACACGGCTCCGCCAAATTTAAAAGAGCTAGAGGCGAAGCTTGA AGAAACAAGAAAAGAAAAAGACGCTTCTGTCCAAAGCCAAGAATTTGAAAAGGCCGCTTCCTTACGTGATACCGAACAAC GGTTGCGTGAAGAGCTGGAAGAAATGAAAAATGAGTGGAAGAAAAAGCAAGGTCAAGAAAACACAGAAGTATTGGTTGAG GATATCGCCCAAGTTGTTTCTAGCTGGACAGGAATTCCGGTTTCCAAACTAGCGGAAGAGGAAACGGAACGTTTGTTGAA AATGGAAGAGATTCTCCATGAGCGTGTCGTTGGCCAAGAAGAAGCTGTTAAATCCATTTCGAAAGCGATTCGCCGTGCTC GCGCTGGATTAAAAGATCCAAAGCGGCCAATAGGATCATTTATTTTCCTTGGTCCAACGGGTGTTGGTAAAACCGAGCTT GCCCGGGCTGTAGCAGAAACGTTATTTGGTGATGAAGATGCTGTCATACGGATTGACATGTCTGAGTATATGGAAAAACA CGCAACAAGCCGGCTAGTTGGTTCGCCTCCAGGTTATGTTGGCCATGAAGAGGGTGGGCAATTAACGGAAAAAATCCGTA GAAAGCCTTACTCTGTTATATTGCTTGATGAAATCGAAAAAGCGCACCCCGATGTATTCAATTTGCTTTTGCAAGTATTG GAAGATGGGCGTTTAACGGATTCAAAAGGACGGACTGTTGATTTCCGTAATACAGCTGTCATCATGACATCCAATGTGGG AGCCTCCCAGCTCAAACGCAATAAGTATCTCGGCTTTACAATTGAATCGGAAGGGCAGGAGTACAAAGACATGAAAGACC GTGTCATGTCTGAACTGAAAAACAGCTTCCGCCCTGAATTTTTAAACCGTATAGACGAAATCATTGTGTTCCACTCTCTT GAGAAAAAGCATGTGCGCAAAATTATTACAAAGATGGCCGACCAACTGAAAGGGCGACTTTCAGAGCAAGGCATAGATTT TGAGCTGACAGAAGAAGCAAAAGATAAAATCACTGATATCGGTTTTGATCCAGAATACGGGGCCCGCCCATTACGCCGGG CTTTGCAAAAAGAAGTAGAAGACCGTTTGTCAGAGGAACTGTTAAAAGGCACAATTGTCAAAGGCCAAAAAGCGGTTATC TATGTGAAAGATGGCAAACTAATGGTAGAAGGAAAAGAAAAATCAAGCATTTCCTGA Protein sequence : MIFGRFTERAQKVLALSQEEAIRLSHHNIGTEHILLGLIREGEGIAAKALQQLGLGSEKLQKEVETLVGKGQEGQKSIHS TPHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEGGSSSQSNGA ATNANTPTLDSLARDLTAIAREETLDPVIGRSREIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQSIVANEVPETL RNKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGA TTLDEYRKYIEKDAALERRFQPIQVDEPTIDESIQILYGLRDRYEAHHRVTITDEAVEEAVKLSDRYISDRFLPDKAIDL IDEAASKVRLRSYTAPPNLKELEAKLEETRKEKDASVQSQEFEKAASLRDTEQRLREELEEMKNEWKKKQGQENTEVLVE DIAQVVSSWTGIPVSKLAEEETERLLKMEEILHERVVGQEEAVKSISKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTEL ARAVAETLFGDEDAVIRIDMSEYMEKHATSRLVGSPPGYVGHEEGGQLTEKIRRKPYSVILLDEIEKAHPDVFNLLLQVL EDGRLTDSKGRTVDFRNTAVIMTSNVGASQLKRNKYLGFTIESEGQEYKDMKDRVMSELKNSFRPEFLNRIDEIIVFHSL EKKHVRKIITKMADQLKGRLSEQGIDFELTEEAKDKITDIGFDPEYGARPLRRALQKEVEDRLSEELLKGTIVKGQKAVI YVKDGKLMVEGKEKSSIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 57 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-96 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_173625.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 75 |
| clpC | YP_173625.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 2e-153 | 53 |
