Gene Information

Name : hemC (syc0575_c)
Accession : YP_171285.2
Strain : Synechococcus elongatus PCC6301
Genome accession: NC_006576
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 645745 - 646707 bp
Length : 963 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGGTCTCCAGCCCTGCCCGTCCGATTCGTATTGGCTCTCGCAAAAGCCAACTAGCCTTGGTGCAAACCCACTGGGTGCA
AGGCGAACTGCAACGGCTCTATCCCGATCGCCAGTTCGATGTGCAGACGATGAGTACCCAAGGCGACATCATTCTGGATG
TGGCGCTGGCCAAGATTGGTGACAAAGGATTGTTCACCAAAGAACTAGAAGTTGCCATGCTGGCGGGCGAAGTGGATTTT
GCCGTCCACTCTCTCAAAGATTTGCCGACGCGCCTGCCCGAAGGCTTAATCCTTGGCTGTGTCACCGAGCGGGAAGATCC
GGCGGATGCCCTGGTCGTCCACGATCGCTTCAAGGATCATCAGCTCGAAACTCTGCCCGAAGGCACCGTGATTGGCACCT
CGTCGCTGCGCCGTTTGGCTCAGTTACGCCACCACTATCCACACCTGCAGTTCAAGGATGTGCGGGGTAACCTCAACACC
CGCCTCGCCAAATTGGATGCCGGTGAATACGATGCGCTGATTCTGGCAGCGGCTGGCTTGCAACGCCTGAGCATGGCCGA
TCGCATTCACCAGTTGATTCCCGCAGCAGTCTCGCTCCATGCCGTGGGTCAAGGCGCGCTGGGGATCGAATGCCGCGCTG
AAGATCCCGAAATCCTAGAACTGCTCAAAGCGCTAGAGCACGAACCCACGTCGCAGCGTTGTTTGGCAGAACGGGCCTTC
CTGCGGGAACTGGAAGGCGGCTGCCAAGTCCCGATCGGCGTCAACACCGCGATCGCGGATGGCACCCTGACCCTGACGGG
CATGGTCGCTAGCTTGGATGGCCAACGCCTACTGCGCGATCAAGTCAGCGGCCCCACCAGCGATCCAGAGGCACTGGGCT
TGGCGCTAGCTGCTCAGCTCAAAGCCCAAGGTGCGAAGGAAATTCTCGACGAGATTTTCGCGACTGTTCGCCCTGAAGCT
TAG

Protein sequence :
MVSSPARPIRIGSRKSQLALVQTHWVQGELQRLYPDRQFDVQTMSTQGDIILDVALAKIGDKGLFTKELEVAMLAGEVDF
AVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLETLPEGTVIGTSSLRRLAQLRHHYPHLQFKDVRGNLNT
RLAKLDAGEYDALILAAAGLQRLSMADRIHQLIPAAVSLHAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAF
LRELEGGCQVPIGVNTAIADGTLTLTGMVASLDGQRLLRDQVSGPTSDPEALGLALAAQLKAQGAKEILDEIFATVRPEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-61 52
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-61 52