Gene Information

Name : rph (syc0476_c)
Accession : YP_171186.1
Strain : Synechococcus elongatus PCC6301
Genome accession: NC_006576
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 535637 - 536353 bp
Length : 717 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGGCTTGGATTCGTCCCGATGGTCGCCGCCCCGATCAGTTGCGAGCGATCGCCTTTCAGCGGCGCTTCACCCAATTTCC
AGCCGGCTCAGTTCTGGCTCAGTTTGGGCAGACGCAGGTGCTCTGTACTGTGACGATTCAGGCGGGTGTGCCGCGCTGGC
TGACGGGCCAAGGGCAGGGTTGGCTGACGGCAGAATATCGCATGTTGCCCGGGGCGACCCCCGATCGCCAGTCGCGGGAA
TGGCTGAAACTGTCGGGACGCACGCAGGAGATTCAGCGCTTGATTGGCCGGAGTTTACGGGCGGCGATCGACCTGAAAAA
GTTGGGTGAGCGTACCCTTCTGATTGACGCCGATGTTCTGCAAGCGGATGCCGGAACGCGCACTACCGCGATCAATGGCA
GCTGGGTCGCACTTCAGGATGCGATCGCCCAGTTGATCGCTCAAGGAGAGCTGACGGAGTCCCCGATTCAGCGATCGATT
GCAGCCGTTTCCGTGGCCTTGATTGGTGGCGAAGCGTTTCTGGATCCGGACTATCCCGAGGATGTCCAAGCCGACGTGGA
TTGCAATGTGGTGATGGGCGATCGCGGCGAGCTGATCGAAATTCAAGGTACAGCGGAGGCCAACCCTTTCAGCCGCACGC
AGCTCAATCACATTTTGGATCTAGCTGAGCAGGGAATTGCCCAGATTCAAGCGGCTCAGTTAGAGGCTCTGCGCTAG

Protein sequence :
MAWIRPDGRRPDQLRAIAFQRRFTQFPAGSVLAQFGQTQVLCTVTIQAGVPRWLTGQGQGWLTAEYRMLPGATPDRQSRE
WLKLSGRTQEIQRLIGRSLRAAIDLKKLGERTLLIDADVLQADAGTRTTAINGSWVALQDAIAQLIAQGELTESPIQRSI
AAVSVALIGGEAFLDPDYPEDVQADVDCNVVMGDRGELIEIQGTAEANPFSRTQLNHILDLAEQGIAQIQAAQLEALR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 6e-50 57