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Name : syc0460_c (syc0460_c) Accession : YP_171170.1 Strain : Synechococcus elongatus PCC6301 Genome accession: NC_006576 Putative virulence/resistance : Virulence Product : ClpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 513442 - 516093 bp Length : 2652 bp Strand : - Note : - DNA sequence : ATGGGTTCATCGCTGGAACTTCTCACCATGCAACCGACGAATCCCAATCAATTTACTGAAAAAGCCTGGGAAGCGATCGT TCGCACAACTGATGTTGCGAAACAAGCTCAGCATCAGCAAATTGAATCAGAACATCTGTTTTTGGCCTTGCTTCAAGGAC CAGGGCTGGCTCTGAATATCCTCAAGAAAGCAGGGTTAGAAGCGGCACAACTACAGCAGTTTACAGAGCGGTTTATTGCC CGCCAGCCAAAGGTGAGTGGGGGTAATCAGTCGGTTTATCTGGGGCGATCGCTCGATCAACTCCTCGATCAGGCGGATCA GTTTCGCAAGGACTTTGGGGATGAATTTATTTCGGTTGAGCACCTCATCCTCAGCTTTCCCCGCGATTCCCGTTTTGGGC GCTTGCTCAGTCAAGAATTCAAGGTTGACGAGAAGCAGCTCCGTCAGATTATTCAACAGATTCGAGGCAGCCAAAAAGTG ACTGATCAAAACCCTGAAGGTAAATACGAAGCCCTCGAAAAATATGGGCGTGACCTGACTGAAATGGCGCGTCGTGGCAA GCTCGATCCCGTCATTGGCCGCGATGATGAAATCCGTCGCACTATTCAGATTCTCAGTCGGCGCACCAAGAATAATCCGG TCTTGATTGGCGAGCCTGGGGTTGGCAAAACTGCGATCGCAGAAGGATTAGCCCAGCGGATTATTAATGGTGATGTCCCG CAATCCCTCAAGGATCGGCGGCTGATTGCTTTGGACATGGGTGCCTTAATTGCAGGTGCTAAATTCCGGGGTGAGTTTGA AGAACGCCTGAAAGCAGTCCTCAAGGAAGTCACTGACTCTGAAGGCATCATTATCCTCTTTATTGATGAGATTCATACGG TGGTTGGTGCTGGAGCGGTCCAAGGCTCCATGGATGCTGGCAACTTACTGAAGCCGATGCTGGCGCGGGGAGAATTGCGC TGTATTGGGGCAACCACACTAGATGAATATCGCCAATATATTGAGAAGGATGCGGCTCTTGAACGACGCTTCCAACAGGT CTTTGTCGATCAACCTACGGTAGAAGATACGATCTCGATTTTGCGTGGCTTAAAAGAGCGCTATGAAGTGCATCATGGCG TCCGTATTTCTGACAACGCTCTTGTCGCTGCTGCTGTCCTCTCGACCCGCTACATCAGCGATCGCTTCTTGCCAGATAAG GCGATTGATTTAGTCGATGAGTCGGCGGCTCGACTCAAGATGGAAATCACTTCAAAGCCAGAAGAATTAGATGAGATCGA TCGCAAGATTCTCCAGCTCGAAATGGAACGACTCTCCTTGCAAAAAGAGAGTGATCTTGCCTCACAGGAACGTCTGCAAC GGCTAGAAAAAGAGTTGGCCGACCTAAAAGAAGAGCAGCGGAGTTTAAGCAGTCAATGGCAAGCTGAAAAGGATGTTATT ACTGATATCCAATCCGTCAAGGAAGAGATTGATCAGGTTAACTTGCTAATGCAACAGGCTGAGCGAGATTACGACCTGAA CAAAGCAGCTGAGCTGAAGTACGGCAAACTGACAGAACTGCAGCGCAAGCTCAACGAAATGGAGGGCGGTTTAGCGACGA CCCACACCAGTGGCAAGTCTCTGCTGCGCGAAGAAGTGACAGAGGTTGACATTGCTGAAATCATCTCTAAGTGGACGGGG ATTCCTGTCAGCAAGCTGGTTGAGTCAGAGATGCAAAAGCTCCTCAATCTCGATGAAGAACTGCATCAACGGGTGATTGG CCAAGAAGAAGCGGTTTCTGCTGTCGCGGATGCAATTCAGCGATCGCGAGCTGGGTTGTCTGATCCGAAACGCCCGATCG CGAGCTTCATCTTCTTGGGCCCTACAGGGGTTGGTAAAACCGAGTTGGCCAAAGCCCTAGCTGCCTATCTCTTCGACACT GAAGACGCGATGATTCGCATTGATATGTCGGAGTACATGGAGAAACACGCGGTTTCGCGGCTAATCGGCGCGCCTCCGGG CTACGTCGGCTATGACGAAGGCGGCCAACTCACGGAAGCGGTGCGGCGGCGTCCCTATTCCGTCATCCTCTTTGATGAGA TTGAGAAGGCCCATCCAGATGTCTTCAACGTCATGTTGCAGATTCTCGATGATGGTCGAGTCACCGATAGCCGCGGCCGA ACAGTGGACTTCAAGAATACAATCTTGATTTTGACCAGCAATATCGGTTCGCAATACATTCTCGATGTGGCTGGCGATGA CAGCCGCTACGAAGAAATGCGGAGCCGTGTCACCGAAGCACTGCGGGCTAATTTCCGACCGGAATTTCTGAATCGGGTCG ATGAGACAATCATCTTCCACAGCCTGCGCAAGGATCAGTTGCAGCAGATTGTGCGGATTCAACTGCATCGCCTTGAAGAA CGATTGAGCGATCGCAAATTATCGCTGTCGATGAGTCCAGAAGCGATCGATTTCTTGGTTGAGATTGGTTTTGATCCCGT CTATGGAGCTCGTCCGCTCAAACGAGTCATTCAGCGAGAGTTGGAAACTGCGATCGCTAAGGCGATCCTCAGGGGGCAAT TCAGTGATGGCGACACGATTCAAGTTGCTGTGGAGAATGAACGACTCGTCTTTAAGGCGATCGCAACTCCAACTGCGGTT CCCCTGAGCTAA Protein sequence : MGSSLELLTMQPTNPNQFTEKAWEAIVRTTDVAKQAQHQQIESEHLFLALLQGPGLALNILKKAGLEAAQLQQFTERFIA RQPKVSGGNQSVYLGRSLDQLLDQADQFRKDFGDEFISVEHLILSFPRDSRFGRLLSQEFKVDEKQLRQIIQQIRGSQKV TDQNPEGKYEALEKYGRDLTEMARRGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGDVP QSLKDRRLIALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGIIILFIDEIHTVVGAGAVQGSMDAGNLLKPMLARGELR CIGATTLDEYRQYIEKDAALERRFQQVFVDQPTVEDTISILRGLKERYEVHHGVRISDNALVAAAVLSTRYISDRFLPDK AIDLVDESAARLKMEITSKPEELDEIDRKILQLEMERLSLQKESDLASQERLQRLEKELADLKEEQRSLSSQWQAEKDVI TDIQSVKEEIDQVNLLMQQAERDYDLNKAAELKYGKLTELQRKLNEMEGGLATTHTSGKSLLREEVTEVDIAEIISKWTG IPVSKLVESEMQKLLNLDEELHQRVIGQEEAVSAVADAIQRSRAGLSDPKRPIASFIFLGPTGVGKTELAKALAAYLFDT EDAMIRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGR TVDFKNTILILTSNIGSQYILDVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDETIIFHSLRKDQLQQIVRIQLHRLEE RLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKRVIQRELETAIAKAILRGQFSDGDTIQVAVENERLVFKAIATPTAV PLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-109 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-109 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| syc0460_c | YP_171170.1 | ClpB protein | VFG2076 | Protein | 5e-124 | 44 |
| syc0460_c | YP_171170.1 | ClpB protein | VFG2084 | Protein | 2e-114 | 43 |
