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Name : kdpB (syc2420_c) Accession : YP_173130.1 Strain : Synechococcus elongatus PCC6301 Genome accession: NC_006576 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 2575365 - 2577455 bp Length : 2091 bp Strand : - Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGTCCGTGCTTTCCCGTCATCATCGTGCGCCGGGTGGACCGCGATCGCAGCGCCGACACCTCGCTCAACCCCAACGCCA AGGACTGTATCGGCGCGCCTTTTTTGAAGCCTTTCGCAAACTCGATCCTCGCCAGGTCGTTCGCAATCCGGTGATGTTCG TCGTCTGGCTCGGCACGGTCCTTACGTTTCTGCTCGTCCTCGATCCAGGCTTATTTGGCAGCAGCAACGAGCCGGGAGCA CGTTCGTTCAATGCTCTGATTTGCCTAACCCTGTTTCTGACGGTTTGGTTTGCCAACGCCGCTGAAGCGATCGCAGAAGG GCGCGGCAAAGCGCAGGCCGATGCCCTGCGAGCTACACAGACCCAGACCCTAGCGCGGCGACTGACGGCCGGCGGTACGG TCGAATCGGTCAACTCCCCGGAGCTTCGCAAGGGCGATCGCGTTGTCGTGGCAGCAGGAGAGATGATCCCTGCCGATGGC GAAGTGATTGCGGGGGTCGCCTCCGTCGATGAATCGGCGATTACCGGCGAATCGGCTCCTGTCCTCAAGGAAGCAGGCTC AGATGTAGCCAGTTCCGTCACTGGGGGGACGCGGGTGATCTCGGATCAATTGACGATTCAAATCACCTCCGAACCGGGCA AAGGCTTCATCGATCGCATGATCCAGCTGGTCGAAGGGGCCAAACGCAGCAAAACCCCGAACGAAATTGCCCTGACGGTG CTGTTGGCGGTTTTGACGCAAATCTTTCTGATTGCGATCGCGACGCTGTCACCGATCGCCACCTACCTCGGCAGTCCGAC CCCCGTCGCCACGCTGATTGCTCTACTCGTCGCGTTGATTCCGACCACGATCGGCGGTCTCTTGAGTGCGATCGGCATCG CTGGCATGGATCGGGTGGCGCAATTTAATGTGATTGCAACTTCCGGTCGCGCCGTTGAAGCCTGCGGTGATATCAATACC CTCGTTCTCGACAAGACCGGCACGATTACCCTTGGCAACCGTTTAGCGGATTCCTTCATTTCTCTTGCTGGGCGATCGCC TGCAGATGTCGCTAGAGCGGCTTGGATTGCCAGCTATTTTGACAACACGCCGGAGGGCAAATCGATTGTCCGCTTGGCAG AAAGTCAGCTGGGGCAATTGGACTTTGACTGGCCATCGACCACCGGCATCGATTTTTCAGCACGGACTCGGATGAGTGGC ACCGACACTTCGGATGGGCAGGAGTTTCGCAAAGGGGCGGTCGATGCGATTAAAGGCTTTGCGCGATCGCGAGGCGGCAG CATTCCCGCCGATTTAGACGCCGCCTTTGAACAGATCTCGCGCTTGGGCGGCACTCCGCTCGCCGTCTGTATCGACTCAG AAATCTACGGCGTCATCTACCTCAAAGACATCATCAAGACTGGCATTCGTGAGCGCTTCGATCAGCTGCGGCGCATGGGC ATTCGTACCGTCATGCTGACCGGCGATAACCATCTGACCGCCTCGGTGATTGCGGCCGAAGCCGGGGTCGATGACTTCAT TGCCGAAGCCACACCGGAAGACAAAATCGCCGTGATTCAAGCCGAGCAAAGCCAGGGCAAACTGGTGGCCATGACCGGGG ATGGCACCAATGACGCCCCCGCTTTGGCCCAAGCCAATGTTGGTCTCGCCATGAATTCCGGCACCCAAGCCGCTAAGGAA GCCGCCAACATGGTCGATCTGGACTCAGACCCAACCAAGTTGATCGATGTGGTGACGATCGGCAAGCAATTGTTGATTAC CCGCGGTGCCTTAACAACCTTTTCGATCGCCAACGATGTCGCCAAGTACTTTGCGATTTTGCCGGCCCTGTTCATCAACG CCGGGTTAGCCCCCTTGAATGTGATGGGTCTAGCCACCCCACGATCGGCGCTGCTGGCTGCGATGCTCTACAACGCCTTG ATCATTCCAGCCTTGATTCCGCTGGCGCTCAAAGGTGTTAAATTCCGGCCCCTCACTGCCAACGAGCTGTTACAACGCAA TCTCTTGATCTACGGACTGGGCGGCTTGATTGCACCATTTCTGGCGATTAAAGCGATCGATTCCGTGATTGTTCGTTCGG GGATTCTTTAG Protein sequence : MSVLSRHHRAPGGPRSQRRHLAQPQRQGLYRRAFFEAFRKLDPRQVVRNPVMFVVWLGTVLTFLLVLDPGLFGSSNEPGA RSFNALICLTLFLTVWFANAAEAIAEGRGKAQADALRATQTQTLARRLTAGGTVESVNSPELRKGDRVVVAAGEMIPADG EVIAGVASVDESAITGESAPVLKEAGSDVASSVTGGTRVISDQLTIQITSEPGKGFIDRMIQLVEGAKRSKTPNEIALTV LLAVLTQIFLIAIATLSPIATYLGSPTPVATLIALLVALIPTTIGGLLSAIGIAGMDRVAQFNVIATSGRAVEACGDINT LVLDKTGTITLGNRLADSFISLAGRSPADVARAAWIASYFDNTPEGKSIVRLAESQLGQLDFDWPSTTGIDFSARTRMSG TDTSDGQEFRKGAVDAIKGFARSRGGSIPADLDAAFEQISRLGGTPLAVCIDSEIYGVIYLKDIIKTGIRERFDQLRRMG IRTVMLTGDNHLTASVIAAEAGVDDFIAEATPEDKIAVIQAEQSQGKLVAMTGDGTNDAPALAQANVGLAMNSGTQAAKE AANMVDLDSDPTKLIDVVTIGKQLLITRGALTTFSIANDVAKYFAILPALFINAGLAPLNVMGLATPRSALLAAMLYNAL IIPALIPLALKGVKFRPLTANELLQRNLLIYGLGGLIAPFLAIKAIDSVIVRSGIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 5e-142 | 58 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-142 | 58 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-142 | 58 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-142 | 58 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-142 | 58 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 5e-142 | 58 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 2e-136 | 55 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 2e-136 | 55 |
