Gene Information

Name : pyk (syc1406_d)
Accession : YP_172116.1
Strain : Synechococcus elongatus PCC6301
Genome accession: NC_006576
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1520796 - 1522580 bp
Length : 1785 bp
Strand : +
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGCAACCCAACGACTTTCAGCGCCGCACTAAAATTGTCGCCACGATTGGCCCTGCAACGTCCAAGCCCGAGGTGCTACG
GGCGTTGATCGAAGCTGGCGCATCGACATTACGGCTCAATTTCTCCCACGGAACCCACGACGATCATCAGCGCAGCATTC
GCCTGATCCGTCAGATCTCCTTCGAGCTCAATCGTCCCGTTGGCATTCTGCAAGACTTGCAGGGACCGAAAATCCGCCTC
GGTCGTTTTGCCGATGGCCCAATTACAGTCCAAAAGGGTGACTCCTTCATCCTGACCAGCCGCAGTGTACCGGGCTCGCA
AACAATCAGCTCGGTCACCTATGAACCGCTGGCCGATGAAGTGCCGGAAGGCGCAACGATTCTGCTTGATGATGGCCGCG
TCGAAATGACGGTGGTCAAGGTCGATCGCCAAACTCGTGAGCTGCACTGCGAAGTCGTGGTGGGTGGCATCCTCTCGAAT
AACAAAGGGGTCAACTTCCCCGGCGTCTATCTGTCTGTCAAAGCCCTGACGGATAAAGACCGCGAAGACCTGATCTTTGG
TCTGGATCAAGGGGTGGACTGGGTCGCCCTCAGCTTTGTCCGCAACCCGCAGGATGTTCTCGAAATCAAAGAACTGATCT
CTCGGGCTGGGAAGTCAGTGCCCGTGATCGCCAAGATTGAGAAGCACGAAGCGATCGAGCAGATGGAAGCCGTGCTCTCG
CTCTGTGATGGCGTGATGGTGGCGCGGGGTGACCTCGGCGTTGAGCTGCCAGCAGAAGAAGTGCCGATTCTGCAAAAACG
ACTGATTCGCACCGCCAATCGTCTCGGCATTCCGGTGATTACCGCGACCCAAATGCTGGACAGCATGGTCAGCAATCCGC
GGCCGACCCGGGCTGAGATTTCGGACGTCGCTAACGCCATTCTGGATGGCACCGACGCGGTGATGCTCTCCAACGAAACA
GCCGTCGGTAAGTTTCCGATTGAAGCCGTTTCAACCATGGCCACGATCGCCCATCGGATCGAAGCTGAGCAGCAATACAT
CACCCTCAACCCGACGCCGACTAGCTCGATTCCCAATGCGATCAGCCAAGCGGTGGGTCATATCGCCGAGCAATTAGATG
CGGCCGCAATTATGACCCTGACCCAAAGCGGCGCGACAGCCCGCAACGTCTCCAAATTCCGCCCGACCACGCCGATTTTG
GCGGTTACGCCCAACATTGATGTAGCGCGTCAGCTGCAACTGGTTTGGGGCGTGCAGCCGCTTCTGGTCGTTGATTTGCC
TTCGACGAGCCAAACCTTCCGCGCTGCCCTCAACGTCGCCCAAGAGCGCACTTTGCTCAAAGAAGGCGATCTGGTAGTGA
TGACAGCCGGCACCCTGCCGGGCGTTTCCGGTTCCACTGACTTGGTCAAGGTCGAAATCGTCACGGCAGTGATTGCTCGG
GGGATTGGCGTTGGACAGGGTAGTGTCAGTGGCAAGGCTCGCGTCATCCACAATGCAGCGGAAGCGGCGACCTTGGCCCA
AGGTGAAATTCTGATTGCCACCCAGACCTCAGCGGACTACATCGAAGCGATTCGCAAAGCCAGCGGCATTGTCACGGAAG
AGGAAGGCTTGACCAGCCATGCCGCCGTGATTGGCCTGCGCCTCGGTATTCCCGTGATTGTTGGCGTCAAGAACGCCACT
AGCGTCGTGCGTGACGGTTCAATCCTGACGCTGGATGTGAAGCGCGGGCTACTCTACTCCGGTGCCGTTGGGGCTGTTGC
TGCCGAGCAGCCGATTTCCGTCTAA

Protein sequence :
MQPNDFQRRTKIVATIGPATSKPEVLRALIEAGASTLRLNFSHGTHDDHQRSIRLIRQISFELNRPVGILQDLQGPKIRL
GRFADGPITVQKGDSFILTSRSVPGSQTISSVTYEPLADEVPEGATILLDDGRVEMTVVKVDRQTRELHCEVVVGGILSN
NKGVNFPGVYLSVKALTDKDREDLIFGLDQGVDWVALSFVRNPQDVLEIKELISRAGKSVPVIAKIEKHEAIEQMEAVLS
LCDGVMVARGDLGVELPAEEVPILQKRLIRTANRLGIPVITATQMLDSMVSNPRPTRAEISDVANAILDGTDAVMLSNET
AVGKFPIEAVSTMATIAHRIEAEQQYITLNPTPTSSIPNAISQAVGHIAEQLDAAAIMTLTQSGATARNVSKFRPTTPIL
AVTPNIDVARQLQLVWGVQPLLVVDLPSTSQTFRAALNVAQERTLLKEGDLVVMTAGTLPGVSGSTDLVKVEIVTAVIAR
GIGVGQGSVSGKARVIHNAAEAATLAQGEILIATQTSADYIEAIRKASGIVTEEEGLTSHAAVIGLRLGIPVIVGVKNAT
SVVRDGSILTLDVKRGLLYSGAVGAVAAEQPISV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-89 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-89 45
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-89 45
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-89 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_172116.1 pyruvate kinase VFG0479 Protein 1e-89 45