Gene Information

Name : ribD (syc1308_d)
Accession : YP_172018.1
Strain : Synechococcus elongatus PCC6301
Genome accession: NC_006576
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 1415295 - 1416401 bp
Length : 1107 bp
Strand : +
Note : 5-amino-6-(5-phosphoribosylamino)uracil reductase

DNA sequence :
ATGAGTGATCGCGATCGCCAGTACATGCAGCGCTGTTTGGAACTAGCAGCCCAAGCAGCTGGACAAACCGCCCCCAACCC
GATGGTCGGCTGCATCATCGTCCAAGGCGAGGAAATCGTGGGTGAAGGCTTCCATCCGGCCGCCGGTCAGCCCCATGCCG
AAGTGTTTGCCCTGCGACAAGCGGGCGATCGCGCTCGGGGAGCAACGCTCTACGTCAATCTTGAACCCTGTAATCACTAT
GGCCGGACGCCGCCTTGTAGCGAAGCAGTCGTCGCCGCTGGTCTAAAGCGGGTTGTAGTCGGCATGGTTGACCCTGATCC
CCGAGTGACCGGTGGTGGCATTGCGCGACTTCAGCAAGCAGGCATCGAAGTCACGGTCGGCGTCGAGCAAGCCGCCTGTG
AGCAAATGAATGAAGCGTTTGTTTGGCGGGTGACTCAGCGTCGTCCCTTTGGCATTCTCAAGTACGCCATGACCTTGGAT
GGCCGGATCGCCGCCAGTACAGGGCATAGCGCCTGGGTCAGCAGTCCTGAATCACGTCGCCAAGTTCACTCACTGCGATC
GCAAGTGGATGCAGTGATTGTGGGCGGCAATACAGTGCGGCTGGACAACCCCCGTCTGACTTGTCATGACATCAGCGATC
GCCATCCCCTGCGGGTCGTGATGAGTCGCCGTTTGGATTTGCCGTTAGAGGCTAACCTCTGGCAGACCGACATTGCGCCA
ACACTCGTTTTTACTGAAGAGACTGCCGATCGCGATCGCTGGCGGAAACTCGAAGACCAAGGCGTAGAAGTGGTTGTGCG
ATCGCCCCTCACGCCGAGTGAAGTCAGTGCTGAGTTATTCAATCGCGGTCTTTCGACCCTGCTCTGGGAATGTGGCGGTA
CTTTGGCGGCAGCGGCTTTGCGAGAAGGTCTGATCCAGAAGCTGCTGGCTTTCATTGCCCCCAAACTCATTGGTGGCCCG
CCTGGCTATAGCCCTGTCGGTGATTTGGGTTTACTGCGAATGGATCAAGCCCTCAAAGTCGAGCGATCGCAGTGGCAAGC
GATCGGGCCAGATCTCTGCTGGACCGCCTATCTTGATCTCGTCAGCGGGCAAGAAGGAGTGTCTTAG

Protein sequence :
MSDRDRQYMQRCLELAAQAAGQTAPNPMVGCIIVQGEEIVGEGFHPAAGQPHAEVFALRQAGDRARGATLYVNLEPCNHY
GRTPPCSEAVVAAGLKRVVVGMVDPDPRVTGGGIARLQQAGIEVTVGVEQAACEQMNEAFVWRVTQRRPFGILKYAMTLD
GRIAASTGHSAWVSSPESRRQVHSLRSQVDAVIVGGNTVRLDNPRLTCHDISDRHPLRVVMSRRLDLPLEANLWQTDIAP
TLVFTEETADRDRWRKLEDQGVEVVVRSPLTPSEVSAELFNRGLSTLLWECGGTLAAAALREGLIQKLLAFIAPKLIGGP
PGYSPVGDLGLLRMDQALKVERSQWQAIGPDLCWTAYLDLVSGQEGVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 7e-48 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 7e-48 42