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Name : clpC (syc1253_d) Accession : YP_171963.1 Strain : Synechococcus elongatus PCC6301 Genome accession: NC_006576 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease regulatory subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1362403 - 1364922 bp Length : 2520 bp Strand : + Note : - DNA sequence : ATGCCTGTGCTAGAATCGGCCTACCGGCACGCAGGCAGGGAAGCTATGTTTGAACGCTTTACCGAGAAAGCCATTAAGGT CATCATGCTGGCTCAGGAGGAAGCGCGTCGCCTGGGTCATAACTTCGTCGGCACCGAGCAAATTTTGCTAGGCCTCATCG GTGAAGGCACCGGCGTTGCCGCCAAAGTTTTGAAATCGATGGGTGTCAACCTTAAGGATGCTCGCATCGAGGTTGAAAAA ATCATTGGCCGTGGCTCGGGTTTTGTCGCCGCTGAGATTCCGTTTACTCCTCGCGCCAAGCGAGTCCTGGAACTCTCACT GGAAGAAGCGCGGCAACTGGGCCACAACTACATCGGCACTGAGCACCTCTTGCTTGGACTGATTCGGGAAGGTGAAGGCG TTGCGGCCCGTGTTCTCGAAAACTTGGGCGTTGATCTTTCAAAAGTACGGACCCAAGTCATCCGCATGCTCGGCGAGACG GCTGAAGTCTCAACGGGTGGCGGTCAAGGTCGCACCAAAACGCCAACCTTGGATGAATTTGGCTCCAATCTGACCCAGCA GGCTGCCGACGGCAAGCTGGATCCGGTGGTGGGTCGCCAAAAAGAAATTGAGCGGGTGATCCAAATTCTCGGCCGCCGCA CCAAGAATAACCCTGTGCTGATTGGGGAACCGGGCGTCGGTAAAACTGCGATCGCGGAAGGCTTGGCCCAGCGCATTGCC ACCGGCGATATTCCCGACATTCTGGAAGACAAGCGCGTTGTCACCCTTGATATTGGTCTGCTGGTTGCGGGCACCAAGTA TCGCGGTGAGTTCGAAGAACGCCTCAAGAAAATCATGGACGAGATCCGCTCGGCGGGGGACGTCATCTTGGTGATTGACG AGGTTCACACCCTGATTGGTGCCGGCGCCGCTGAAGGTGCGATTGATGCGGCCAACATCCTCAAGCCAGCTTTGGCACGG GGTGAGCTGCAGTGCATCGGTGCAACCACACTGGATGAATACCGCAAGCACATCGAGCGCGATGCCGCCCTAGAACGCCG CTTCCAGCCGGTGATGGTCGGTGAGCCCAGCGTCGATGACACGATCGAAATCCTGCGCGGTCTGCGTGAGCGCTACGAGC AGCACCACAAGCTAAAAATTGCCGATGAAGCGTTGGAAGCAGCTGCCAAGCTGGCCGATCGCTACATCAGCGATCGCTTC CTACCCGACAAGGCGATCGACTTAATCGACGAAGCGGGTTCGCGGGTTCGCCTGATGAACTCGCAACTGCCTCCGGCTGC TAAAGAGTTGGATAAAGAGCTGCGTCAAGTCCTTAAGGACAAAGATGACGCCGTTCGCTCCCAGGACTTTGATAAGGCTG GGGAACTGCGCGATCGCGAAATGGAAATCAAAACCCAAATTCGCTCGATCGCTCAAAGCAAGAAGGCCGACGGTACCAGC AGCACGGATGATTCACCGATCGTCACCGAAGAGGACATCGCTCACATCGTTGCCTCTTGGACGGGCGTGCCGGTCAACAA GCTGACCGAGTCGGAATCGACCAAGCTGCTGAACATGGAGGAAACCCTCCACAGCCGCTTGATTGGTCAGGACGAAGCCG TGAAAGCGGTGTCGCGGGCCATCCGTCGTGCACGTGTCGGCCTGAAAAATCCCAACCGTCCGATCGCCAGCTTCATCTTT AGTGGTCCCACCGGCGTCGGTAAGACTGAGCTGACCAAAGCCTTGGCGGCCTACTTCTTCGGCAGCGAAGAAGCCATGAT CCGGCTTGATATGTCGGAGTACATGGAGCGCCACACGGTCAGCAAGCTGATCGGTTCGCCTCCAGGCTACGTTGGCTACA ACGAAGGCGGCCAACTAACCGAGGCCGTGCGTCGTCGTCCCTATACTGTCGTCTTGCTGGACGAGATCGAGAAAGCCCAT CCCGATGTCCTCAACCTGCTCTTGCAGTTGCTCGAGGACGGTCGTCTGACTGATGCCAAAGGTCGGACCGTGGACTTCAA AAACACCCTGATCATTCTGACTTCGAACATTGGCTCGAAGGTGATTGAGAAAGGCGGCGGCGGTCTCGGGTTTGAATTCT CTGGTGTCGATGAGGCTGAAAACCAGTACAACCGCATTCGCTCCCTAGTGAATGAGGAACTGAAGCAATACTTCCGTCCT GAGTTTCTGAACCGTCTCGACGAAATCATCGTCTTCTGTCAGCTCAACAAGGAAGAAGTCAAAGAAATCGCCGACATCAT GTTGCGCGAAGTCTTCGGTCGGATGCTCGAGAAAGGCATCAGCCTCTCAGTTACCGAGAAGTTCAAAGACCGCTTGGTGG AAGAGGGCTACAACCCCAGCTACGGGGCTCGTCCCCTCCGTCGGGCAATCATGCGCCTGCTCGAAGATTCCTTGGCGGAG GAGTTCCTCTCCGGCAAACTGCGGGAAGGTGACACCGCCGTCGTTGACATTGGTGAAGAGGGCAAGGTTCAAGTTCTTGC GCAAGAGAAGCGTGAGCTACTGCCTCAAGCCGTTGACTAA Protein sequence : MPVLESAYRHAGREAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEK IIGRGSGFVAAEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGET AEVSTGGGQGRTKTPTLDEFGSNLTQQAADGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIA TGDIPDILEDKRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGDVILVIDEVHTLIGAGAAEGAIDAANILKPALAR GELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDDTIEILRGLRERYEQHHKLKIADEALEAAAKLADRYISDRF LPDKAIDLIDEAGSRVRLMNSQLPPAAKELDKELRQVLKDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQSKKADGTS STDDSPIVTEEDIAHIVASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASFIF SGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLLDEIEKAH PDVLNLLLQLLEDGRLTDAKGRTVDFKNTLIILTSNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRP EFLNRLDEIIVFCQLNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPLRRAIMRLLEDSLAE EFLSGKLREGDTAVVDIGEEGKVQVLAQEKRELLPQAVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_171963.1 | ATP-dependent Clp protease regulatory subunit ClpC | VFG0079 | Protein | 0.0 | 60 |
| clpC | YP_171963.1 | ATP-dependent Clp protease regulatory subunit ClpC | VFG0080 | Protein | 4e-145 | 52 |
