|
Name : rpsN (syc1072_d) Accession : YP_171782.1 Strain : Synechococcus elongatus PCC6301 Genome accession: NC_006576 Putative virulence/resistance : Unknown Product : 30S ribosomal protein S14 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0199 EC number : - Position : 1184059 - 1184361 bp Length : 303 bp Strand : + Note : located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are prese DNA sequence : ATGGCGAAAAAAGCGATGGTCGAGCGCGACCGCAAGCGCAAAAAACTAGTTGAAAAGTACGCTGCCAAGCGTGAAGCGCT CAAAGAGCAGTTTGCGGCCGCAACCAGCCAATCGGAACGGCTGGAGCTGCATCGCAAGCTTCAACAACTGCCCCGCAACA GTGCTCCTAACCGTGTGCGCAACCGTTGCTGGGTGACCGGTCGCCCCCGGGGCTACTACCGTGACTTTGGTCTCTGCCGT AACGTGCTGCGGGAGATGGCGCACCAAGGTCTGCTGCCGGGCGTGGTTAAGTCGAGCTGGTAA Protein sequence : MAKKAMVERDRKRKKLVEKYAAKREALKEQFAAATSQSERLELHRKLQQLPRNSAPNRVRNRCWVTGRPRGYYRDFGLCR NVLREMAHQGLLPGVVKSSW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpsN | NP_814350.1 | 30S ribosomal protein S14 | Not tested | Not named | Protein | 2e-13 | 50 |
| ef0103 | AAM75306.1 | EF0103 | Not tested | Not named | Protein | 1e-13 | 50 |
