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Name : lysU (FTT_0192) Accession : YP_169253.1 Strain : Francisella tularensis SCHU S4 Genome accession: NC_006570 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 208813 - 210543 bp Length : 1731 bp Strand : + Note : Similar to SYK2_ECOLI (P14825) Lysyl-tRNA synthetase, heat inducible, from E. coli (504 aa). FASTA: opt: 2003 Z-score: 2242.9 E(): 4.9e-117 Smith-Waterman score: 2003; 61.066 identity in 488 aa overlap DNA sequence : TTGGGGCTACTAATTGCTAATGTGCAACAAATAATTACAGGGTTTAAAATGAGTAGTAAATTAAAAGATTTGATAAAAAC AACGATAAAAGAATATTTAGAAGCTAATGATATCACAGTTAAAGATGCTATTAGAGGCAAGATTAGAGAGCAGATTAGTG AGTTTTTAGGCGAGGTAAGCGAGATAAATGAGCAGGTTAAAGAACAAATTTCAGCGCTTGTGAAAAAGCATGTAACAGAA TTACAAGAAAGCTCACAAATTGCTTTAAGAAAAGAAAAGCTAAAAACTTTAGCTCAGCAAAATAATGGCATAAGCCATCC AAATAGTTTCCGAAGAAATGCTGTTGCTATAGAGTTACAGGCTCGCTATGCTGATAAGACTAAGCAAGAATTAGAAGAGC TAGATAATAAACAACAATATAGTTTGACAGGTAGAGTAGTTCTACGCCGTGTCATGGGTAAAGCATCTTTTATAACACTA CAAGATTATACTGGTAGAATCCAAGTTTATCTAAAAAAGAGTGACTTGCCAGATGGGCAATATGAAACTTTTAAGAATCT ATGTGACTTGGGTGATATAGTTGGTATTACTGGTACTATGTTTAAGACAAATACTGGTGAACTTTCTGTTGAAGCAAATC ACTTTGAGATTTTGACAAAGGCAATTCGTCCTTTGCCTGATAAATTCCATGGTTTGGCAGATCAAGAAATGAGATATCGT CAAAGATATGTTGATTTAATTACAAATGAAAAGGCAAGAGAAGTCTTTAAAGTACGCTCAAAAGTTGTGAACTTTATCCG TAACTATTTTGATAGACTAGATTTTATGGAAGTAGAGACGCCGATGATGCATGTTTTGCAAGGTGGTGGTGCTGCTAAGC CATTTAAAACTCATCACAATGCTTTGGATATGCCTTTATATTTGCGTATTGCTCCAGAACTTTATCTAAAAAGACTAGTT GTTGGTGGTTTTGAGCGAGTTTATGAGATAAACCGTAATTTTAGAAACGAAGGTGTATCTTCACGCCATAATCCAGAATT TACAATGCTAGAGTTCTATATGGCGTATGCTGATTATAATGACCTTATGGATCTAACAGAAGATATGCTATCTAAACTTG TACAGGAAGTAATTGGTAGCGAGATACTTGAGTATGGTGAGTATAAAATCAACTTTGGTGGTAAGTACGAACGAATCTCA ATGGTTGACTCAATTGTTAAGTATAATGATGATATTACCAAAGAAGATTTAGTAACATTTGAATCTGCTAAAAAGATTGC TGAGAAACTAAAAATAAAAGTTGAAGCTTACCATGAACTTGGACATTTGATAAACGAAATATTTGAAGAAACTGTCGAGC ATCAGCTTATTCAACCGACATTTATTACAGATTATCCAGCTGTAGTTTCACCATTGGCGCGTAGACAAGACGGTAACCCT GAGTTTACCGATAGATTTGAGTTCTTTATTGGAGCACGTGAAGTTGCTAACGGCTTCTCTGAGCTAAATGATGCTGAAGA TCAAGCAGAGCGTTTCAGAAAACAGGTTGAAGCTGCGGCATCTGGAGATGATGAAGCTATGCCTTATGATAAAGACTATA TCCGCGCACTAGAGTATGGTATGCCTCCTACAGCGGGACAAGGAATCGGTATTGATAGACTGGTAATGTATCTAACAAAC TCTCAATCAATTAGAGATGTGATTCTATTTCCGCATATGAAGCCTGAGTAA Protein sequence : MGLLIANVQQIITGFKMSSKLKDLIKTTIKEYLEANDITVKDAIRGKIREQISEFLGEVSEINEQVKEQISALVKKHVTE LQESSQIALRKEKLKTLAQQNNGISHPNSFRRNAVAIELQARYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITL QDYTGRIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMFKTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYR QRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGGAAKPFKTHHNALDMPLYLRIAPELYLKRLV VGGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERIS MVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETVEHQLIQPTFITDYPAVVSPLARRQDGNP EFTDRFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTN SQSIRDVILFPHMKPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-138 | 56 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 5e-85 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysU | YP_169253.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-138 | 56 |
