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Name : nusG (FTT_0139) Accession : YP_169205.1 Strain : Francisella tularensis SCHU S4 Genome accession: NC_006570 Putative virulence/resistance : Unknown Product : transcription antitermination protein nusG Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 151907 - 152440 bp Length : 534 bp Strand : + Note : Similar to NUSG_VIBVU (Q8DD25) Transcription antitermination protein nusG from Vibrio vulnificus (181 aa). FASTA: opt: 687 Z-score: 868.9 E(): 1.7e-40 Smith-Waterman score: 687; 58.621 identity in 174 aa overlap DNA sequence : ATGCTTTGGTATGTTGTGCAGGTGCACTCAGGTTACGAAAAAAGAGTGAAAGCTCAGCTTGAAGAAAATATCGAGATAGC TGGATTGAAAAATAATTTTGGCAGAATTCTTGTTCCTACTGAAAATGTGGTTGAGATGAAAGGTGGGCAAAAGCGTAAGA GCGAAAGAAAATATTTTCCAGGCTATGTTTTGATTGAGGCTGATTTATCAACAGATGCTTGGAATCTTGTTAAATCGGTT CCACGTGTGCTAACTGTTGTTGGTTCTAAGGGTAAGCCGATACCTTTGAGCAAAGCGGAAGTAGATAGAATATTAGATTT TGTCGAAGGAAGTAAATCCACTGTAGAGCCAAGATTGAGAAAATCTTATCACGTTGGTGAAGTTGTTCGAGTCCTAGAAG GACCATTTAATGACTTTACTGGCGTTATTGAAGAAGTTAACTATGAGAAATCAAGGTTAAGGGTTGCAGTGTCTATCTTT GGTAGATCTACGCCTGTTGAGCTTGAGTTTTCTCAAGTTGAAAAAGAATCTTAG Protein sequence : MLWYVVQVHSGYEKRVKAQLEENIEIAGLKNNFGRILVPTENVVEMKGGQKRKSERKYFPGYVLIEADLSTDAWNLVKSV PRVLTVVGSKGKPIPLSKAEVDRILDFVEGSKSTVEPRLRKSYHVGEVVRVLEGPFNDFTGVIEEVNYEKSRLRVAVSIF GRSTPVELEFSQVEKES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 3e-43 | 50 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 3e-43 | 50 |
