Gene Information

Name : nusG (FTT_0139)
Accession : YP_169205.1
Strain : Francisella tularensis SCHU S4
Genome accession: NC_006570
Putative virulence/resistance : Unknown
Product : transcription antitermination protein nusG
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 151907 - 152440 bp
Length : 534 bp
Strand : +
Note : Similar to NUSG_VIBVU (Q8DD25) Transcription antitermination protein nusG from Vibrio vulnificus (181 aa). FASTA: opt: 687 Z-score: 868.9 E(): 1.7e-40 Smith-Waterman score: 687; 58.621 identity in 174 aa overlap

DNA sequence :
ATGCTTTGGTATGTTGTGCAGGTGCACTCAGGTTACGAAAAAAGAGTGAAAGCTCAGCTTGAAGAAAATATCGAGATAGC
TGGATTGAAAAATAATTTTGGCAGAATTCTTGTTCCTACTGAAAATGTGGTTGAGATGAAAGGTGGGCAAAAGCGTAAGA
GCGAAAGAAAATATTTTCCAGGCTATGTTTTGATTGAGGCTGATTTATCAACAGATGCTTGGAATCTTGTTAAATCGGTT
CCACGTGTGCTAACTGTTGTTGGTTCTAAGGGTAAGCCGATACCTTTGAGCAAAGCGGAAGTAGATAGAATATTAGATTT
TGTCGAAGGAAGTAAATCCACTGTAGAGCCAAGATTGAGAAAATCTTATCACGTTGGTGAAGTTGTTCGAGTCCTAGAAG
GACCATTTAATGACTTTACTGGCGTTATTGAAGAAGTTAACTATGAGAAATCAAGGTTAAGGGTTGCAGTGTCTATCTTT
GGTAGATCTACGCCTGTTGAGCTTGAGTTTTCTCAAGTTGAAAAAGAATCTTAG

Protein sequence :
MLWYVVQVHSGYEKRVKAQLEENIEIAGLKNNFGRILVPTENVVEMKGGQKRKSERKYFPGYVLIEADLSTDAWNLVKSV
PRVLTVVGSKGKPIPLSKAEVDRILDFVEGSKSTVEPRLRKSYHVGEVVRVLEGPFNDFTGVIEEVNYEKSRLRVAVSIF
GRSTPVELEFSQVEKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 3e-43 50
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 3e-43 50