Gene Information

Name : gtrB (FTT_1433)
Accession : YP_170374.1
Strain : Francisella tularensis SCHU S4
Genome accession: NC_006570
Putative virulence/resistance : Virulence
Product : glycosyl transferase family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : 2.4.1.-
Position : 1480373 - 1481317 bp
Length : 945 bp
Strand : +
Note : Similar to Q55487 glycosyl transferase from Synechocystis sp. (318 aa). FASTA: opt: 1079 Z-score: 1283.0 E(): 1.3e-63 Smith-Waterman score: 1079; 50.000 identity in 298 aa overlap

DNA sequence :
ATGGATAATAAAGATAAGCTAACAAGTATAATAATACCGGTAAAAGATGAAGCAGAAGGCATAGAGCATTTATTTGCTAG
ACTTATGCCAATCCTTGAAAAACTTCCAACCAAATATGAACTTGTCTTTATCAATGATGGTAGTAATGATAATACTCTTG
AACTACTTTTAGAGAAACAAAAAGATATCCCAGAGATCGCTATAGTTGATTTATCACGCAACTTTGGTAAAGAAGCAGCT
TTATTTGCTGGTTTTGCAAACTGTAACGGTGATGCTGCAATATCAATAGATGCCGACCTACAAGATCCTCCAGAACTTAT
TTTAGAAATGGTACAACATTGGTTAGATGGCTATGAGGTTGTCACTGCTGTTAGAGAAAATCGTGATACAGATACTTCAA
CAAAAAAACACACTGCCGGACTTTTCTACAAAGTTATGAATAAAATTAGTGACACTAAACTAACTCCTAATGCTGGCGAC
TATAGATTATTAAATAGAGCTGCTGTCAATGCCTTTTTGGAGCTCAAAGAGAAAATTCGTTTTAACAAAGGCTTACTTAC
TTGGATAGGCTTCAAAGAAAAAATAGTCTACCATGCTCGCGAAGAAAGAGCCGCTGGACAGACTAAATGGAATTATTGGA
AATTGTTTAAGTTTTCTATAGATGGTATCACTAGTTTTAGCCGCGCACCTTTAGAAATATGGTCATATATTGGTGGTGGT
GTTGCACTTATCAGCTTTATTTATGGTTCTATAATAGTTCTAAAATCACTATTATTTGGTGTAGATGTCCCAGGTTATCC
ATCATTAGTAACATTTATACTATTCTTTAGTGGCTTACAGATGATAGGAATCGGAATGCTAGGTAGTTATATAGGCAGAA
TATTTATCGAAACAAAGCACAGACCACTGTACATTATCCGTCAAGTACATAGAGTAAAAGAATAA

Protein sequence :
MDNKDKLTSIIIPVKDEAEGIEHLFARLMPILEKLPTKYELVFINDGSNDNTLELLLEKQKDIPEIAIVDLSRNFGKEAA
LFAGFANCNGDAAISIDADLQDPPELILEMVQHWLDGYEVVTAVRENRDTDTSTKKHTAGLFYKVMNKISDTKLTPNAGD
YRLLNRAAVNAFLELKEKIRFNKGLLTWIGFKEKIVYHAREERAAGQTKWNYWKLFKFSIDGITSFSRAPLEIWSYIGGG
VALISFIYGSIIVLKSLLFGVDVPGYPSLVTFILFFSGLQMIGIGMLGSYIGRIFIETKHRPLYIIRQVHRVKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 1e-60 47
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-60 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gtrB YP_170374.1 glycosyl transferase family protein VFG0670 Protein 4e-62 47