|
Name : serS (FTT_1330) Accession : YP_170282.1 Strain : Francisella tularensis SCHU S4 Genome accession: NC_006570 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1358840 - 1360120 bp Length : 1281 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATGCTAAATATATTAAGGATAATTTACAACAAGTTGCTGAAAAGCTTGCAACTAGAGGTTATCAATTTGATAT AGCCGAATTTGAAGCCCAAGAGCAAAAAAGAAAACATCTTCAAGAAAGAACTCAGGATCTACAATCACAACGTAATACTA TTTCAAAAGAAATAGGCCAAAAAAAAGCTAAAGGTGAAGATACTAGTGATATCTTTGCTAAAGTTAATCAAATTAATGAA GAACTAAAAATTATTGAAAAAGAGCTCAAAGACCTACAAGATACTATAAATCAAACACTATTATCAATGCCAAACCTTCC TGCTGATGACGTCCCTGTTGGTAAAGATGAGAATGATAATGTAGAAATAAGAAGATGGGGAACTCCACGTGAGTTTCATC CTGAAGCACCTGCAAAAGATCATTCTGATATTGGTGAAATCCTCAAAATGATTGATTTTAAAGCCGCTGCTAAAGTTACT GGCAGCCGTTTTATGGTCCTGAAAAATAAGATTGCTAAACTACACCGCGCTCTATCACAGTTTATGCTTGATCTGCATAC AGAAAAACATGGTTATGAAGAATTATATGTGCCATATCTAGTCAATAATGATAGTTTATATGGTACTGGACAATTACCAA AATTTGCTGCTGATCTTTTTAAGCTTGAGGGAGATTTTGAATATAGTCTAATACCTACAGCAGAGGTGCCAATCACTAAT CTAGTAAGGGATGAAATTTTAGATACAGAAACTTTACCTAGATACTATACAGCTCACACTCCTTGCTTTAGAAGTGAAGC TGGTTCATATGGCCGTGATACTAAAGGTATGATTCGTCAACACCAGTTTGAGAAAGTCGAGTTAGTACATATCACTACTG CAGATAAAGGTGAAGAATCTCTAGAATTACTCACATCACATGCTGAAAAAGTCTTACAAAAACTTAACTTACCATATAGA GTGATGAAACTATGTACTGGTGATATGGGCTTTAGCGCTAAAAAAACTTATGATTTAGAAGTATGGCTCCCATCACAAAA TACTTATAGAGAAATATCTTCATGTAGCTGGTGTGGAGATTTCCAAGCTCGTCGTATGAAAGCTCGACACAAAAATCCAA GTATGAAGAAACCAGAATTAGTCCATACTCTAAATGGTTCTGGTTTGGCTGTAGGTAGAACATTATTAGCTATTATTGAA AATTATCAACAAGAAGATGGTTCTATTATGGTTCCCGATGCTCTTATCAAGTATATGGGCGGAATTTCAGTTATTAAGTA A Protein sequence : MLDAKYIKDNLQQVAEKLATRGYQFDIAEFEAQEQKRKHLQERTQDLQSQRNTISKEIGQKKAKGEDTSDIFAKVNQINE ELKIIEKELKDLQDTINQTLLSMPNLPADDVPVGKDENDNVEIRRWGTPREFHPEAPAKDHSDIGEILKMIDFKAAAKVT GSRFMVLKNKIAKLHRALSQFMLDLHTEKHGYEELYVPYLVNNDSLYGTGQLPKFAADLFKLEGDFEYSLIPTAEVPITN LVRDEILDTETLPRYYTAHTPCFRSEAGSYGRDTKGMIRQHQFEKVELVHITTADKGEESLELLTSHAEKVLQKLNLPYR VMKLCTGDMGFSAKKTYDLEVWLPSQNTYREISSCSWCGDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIE NYQQEDGSIMVPDALIKYMGGISVIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-101 | 55 |
