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Name : dnaB (FTT_1059c) Accession : YP_170040.1 Strain : Francisella tularensis SCHU S4 Genome accession: NC_006570 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 1068125 - 1069522 bp Length : 1398 bp Strand : - Note : Similar to DNAB_PASMU (Q9CNL6) Replicative DNA helicase from Pasteurella multocida (467 aa). FASTA: opt: 1484 Z-score: 1719.2 E(): 7.2e-88 Smith-Waterman score: 1484; 51.016 identity in 443 aa overlap. DNA sequence : TTGATGTCTATGGATTATCAGTTTAAAGCTGCTGAAACGACTTACTCTCTAGAAGCAGAAAAAGCTATCTTAGGGAATAT ATTACTGTACAATCAAAATATTGAGTTAGTTGAAGATTTTCTTTTGATTGATGATTTTTTTGATAAAAGACATAAAACCA TCTATAAACAGATTGTCACGCTTAACCAAGCAAACACTCCGTTTGATGTACTAATTTTAAGTGAATACCTTGCCACCGAG GGACTTTTAGAACAAGCAGGTGGTGAGGCTTACATCATAGATTTAGCTGCTAATACACCTTCAATATCAAATATCAAGAC GTACGCTAATATCGTAAAAAATAAGGCTAAGCTTAGAAGTTTACAAAATAGTGTAAATGATATCGTTCAGAAGATATATT CAGCAGATTCAAAAAATCCTGATGAAGTTATTGATTACGCTGAGAGCAGAATACTTGATGTAGCTAAAGAGCGTGAAACA CTTACCAAAGGTCCTGAATCGATAAAGTCTGTAATCCCAAAGCTTGTAGATAGAATGAGTGCTATAGTTGATTCTGGTAG TGGTCTAACAGGGCTTTCAACAGGTTTTATAGATCTTGATAAAATGACATCAGGATTACAAAGAGCAAATATGGGTATCA TAGCAGCTCGACCATCTATGGGTAAGACTGTTTTGGGTATTAACATCGCTCAAAATGTCGCAAAAATTGCTGATAAGCCA GTATTAGTTTTTAGTCTAGAGATGCCGTCAGAAGATATTGTAACAAGGATGTTAGCTTCACAGGCGCGTGTAGAGATGAA TTTATTTAAAGAATGTAATAGGTTAAATGATGCGCATTGGGTTAAAATCACCAGCGCTATGAAAACTTTAAGTGAAATGC CACTATATATTGATGATACATCAAGTTTGACTCCAGCCGAGATGCGTTCAAGAGCGCGAAGATTATATAATGAGCATGGT GGTTTAGCAATGATCTTGATAGATTATCTACAGCTTATGAAAATCCCAGGTTATGAGACTAACCGAACACTAGAGGTATC AGAGATATCCCGTTCACTGAAGGCTTTAGCCAAAGAGTTGGATATACCAGTCATAGCACTATCGCAACTAAATAGAGCAG TAGATGATCGTAAAGATAAACGACCAATGATGTCAGACTTAAGAGAATCAGGAGCAATTGAACAAGATGCTGACTTGATT ATGTTTATTTATCGTGATGAAGTTTATAATAAAGATAAAGAAGATAATAAAAATCTAGGTGAAATAATAATAGGTAAGCA GCGTAATGGTCCTATAGGAACTGTGCATGTGCGCTTTGATGGTCAGTTTGCTAGTTTTGCTAATTTAACTAATGAAAATG ATCATATTTTACCTGGTGATATAGGTTATAACGAGTAA Protein sequence : MMSMDYQFKAAETTYSLEAEKAILGNILLYNQNIELVEDFLLIDDFFDKRHKTIYKQIVTLNQANTPFDVLILSEYLATE GLLEQAGGEAYIIDLAANTPSISNIKTYANIVKNKAKLRSLQNSVNDIVQKIYSADSKNPDEVIDYAESRILDVAKERET LTKGPESIKSVIPKLVDRMSAIVDSGSGLTGLSTGFIDLDKMTSGLQRANMGIIAARPSMGKTVLGINIAQNVAKIADKP VLVFSLEMPSEDIVTRMLASQARVEMNLFKECNRLNDAHWVKITSAMKTLSEMPLYIDDTSSLTPAEMRSRARRLYNEHG GLAMILIDYLQLMKIPGYETNRTLEVSEISRSLKALAKELDIPVIALSQLNRAVDDRKDKRPMMSDLRESGAIEQDADLI MFIYRDEVYNKDKEDNKNLGEIIIGKQRNGPIGTVHVRFDGQFASFANLTNENDHILPGDIGYNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 6e-67 | 44 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-77 | 44 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-76 | 44 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 4e-76 | 43 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-65 | 43 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-75 | 43 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-78 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-71 | 41 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-71 | 41 |
