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Name : gabD-3 (SPOA0275) Accession : YP_165104.1 Strain : Genome accession: NC_006569 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 302576 - 304036 bp Length : 1461 bp Strand : + Note : identified by match to protein family HMM PF00171; match to protein family HMM TIGR01780 DNA sequence : ATGACCACGCTTGCATTGAACGATCCGGGCCTGCTGGAAACCCGCGCCTATGTGAACGGGGTCTGGATCGAGGGCGGCGC GCGCTTTGCCGTGCAGGATCCCGCCACCGGCGACCTGATCGCCGAAGTGGCCGATCTGGGCGCCGCCGACACCGCCGCCG CGATTGATGCGGCCCATGCTGCGGGCCCGGGCTGGGCGGCGCTGACGGGCAAGGAGCGCGGCGCGATCCTGCGCCGCTGG CATGACCTGATGATCCAGAATGCCGACGATCTGGCCACCATCCTGACCGCCGAAATGGGCAAGCCCTGGGCCGAGGCGCG GGGCGAGATCCTCTATGGCGCCTCATTTCTGGAATGGTTCGCCGAAGAAGCCAAACGGGTCTATGGCGAGACCATCCCCG GCCATCAGCGCGACAAGCGGATCGTGGTGCTGAAACAGCCGGTTGGCGTGGTCGGCTCGATCACGCCCTGGAACTTTCCC AACGCGATGATCGCGCGCAAGGTCGCTCCGGCACTGGCGGTGGGCTGCACCTTTGTGGCCCGACCTGCCGAGCTGACGCC GCTATCGGCGCTGGCCATGGCGGTGCTGGCCGAAAGGGCGGGTGTCCCGGCGGGGGTGTTCAACGTGATCCCCTCGCAAG ATGCGGCGGGGGTCGGGGCCGAACTTTGCGCCAATCCCAAGGTCGCCAAGATCACCTTTACCGGCTCGACCCGGGTGGGC CGCCTGCTGATGCAGCAATGCGCCCCCACCATCAAGAAGATGTCGCTGGAACTGGGCGGCAACGCGCCCTTCATCGTGTT CGACGATGCCGATCTGGATGCCGCCGTCGACGGGGCGATGATCGCCAAGTTCCGCAACAACGGCCAGACCTGCGTCTGCG CCAACCGGATCTATGTGCAGGCCCGCGTCTATGACGCCTTCGCCGACAAGCTGGCCGCCAAGGCCGCCCAGCTGCGGGTC GGCAACGGCTTTGACACCGGGGTCACCACCGGACCGCTGATCAACAGTGCGGCGGTATCCAAGGTCGAGGCTCATATCGC CGATGCGCTGGCTGGCGGGGCCGAAGTGGTGCTGGGCGGCACCCGCGCGCCGCTGGGCGGCACCTTCTTTGCGCCAACCG TGCTGCGTGACGTGACCCGCGACATGCTGGTCTGTCGCGAAGAGACCTTTGGCCCGCTGGCCGCGCTGGTGCGCTTCGAG AGCGAGGACGAGGTGATCGACATGGCCAATGACAGCGAGTTCGGTCTGGCCGCCTATTTCTACAGCCGCGATCTGGCGCG GGTCTGGCGGATGGCCGAAGCACTGGAAAGTGGCATGGTCGGCGTCAATACCGGGCTGATCTCGACCGAGGTCGCACCCT TCGGCGGCATCAAGCAATCGGGCCTTGGCCGCGAAGGCTCGCGTCACGGGATAGAGGATTATCTGGAACTGAAATATCTC TGCCTGGGCGGGATCGGCTGA Protein sequence : MTTLALNDPGLLETRAYVNGVWIEGGARFAVQDPATGDLIAEVADLGAADTAAAIDAAHAAGPGWAALTGKERGAILRRW HDLMIQNADDLATILTAEMGKPWAEARGEILYGASFLEWFAEEAKRVYGETIPGHQRDKRIVVLKQPVGVVGSITPWNFP NAMIARKVAPALAVGCTFVARPAELTPLSALAMAVLAERAGVPAGVFNVIPSQDAAGVGAELCANPKVAKITFTGSTRVG RLLMQQCAPTIKKMSLELGGNAPFIVFDDADLDAAVDGAMIAKFRNNGQTCVCANRIYVQARVYDAFADKLAAKAAQLRV GNGFDTGVTTGPLINSAAVSKVEAHIADALAGGAEVVLGGTRAPLGGTFFAPTVLRDVTRDMLVCREETFGPLAALVRFE SEDEVIDMANDSEFGLAAYFYSRDLARVWRMAEALESGMVGVNTGLISTEVAPFGGIKQSGLGREGSRHGIEDYLELKYL CLGGIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-125 | 63 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-66 | 41 |
| unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 4e-38 | 41 |
