Gene Information

Name : SPOA0250 (SPOA0250)
Accession : YP_165079.1
Strain :
Genome accession: NC_006569
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter, DctM subunit
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 274138 - 275418 bp
Length : 1281 bp
Strand : -
Note : identified by match to protein family HMM PF00597; match to protein family HMM PF06808; match to protein family HMM TIGR00786

DNA sequence : 
ATGACCCTTGCTCTCTTCCTTGGCGTTCTGTTGGTTTCGATCTTTCTCGGACTGCCTGTCGCCTTCGCGCTCTTGCTGGC
GTCGATTGCCCTGATGTTCCAGCTGGATACGTTCAGCACCGATATTCTTGCTCAATCCTTGATCAACGGGGTCGATAGTT
TCCCCTTGCTGGCGATTCCCTTCTTTCTGGTCGCTGGCGAGGTGATGTCCGCCGGCGGGCTGTCGCAACGGATCGTGCGT
CTGGCCACCAGCCTTGTCGGGCATCGCCGTGGCGGCCTGGGATATGTGGCGATCTTTACCTCGATCCTGCTTGCCGGTCT
GTCAGGATCTGCGGTTGCCGATGCGGCTGCATTGGTCAGTATTCTTTATCCGATGATGAAGAAGGCCGGCTATCCAGAGG
GCCATTCGATGGGATTGCTCGCATCGGGCGGTATCATCGCACCGGTCATTCCGCCCTCGCTGCCCCTGATCCTTATCGGT
GTCGCTGGTGGTATTTCGATCAAAAGCCTGTTCCTGGGCGGGATCGTGCCCGGGCTCTTGATGGGGCTGACTTTGGTCCT
GGTCTGGGGCGTTCTGATGCGCAAGGAAGACCTCGAGGTTGCGCCGCGCGCCACCGCGGGTGAACGGCTGCGCGCTGTCA
GAGAGGGTTTCTGGGCCTTGCTGCTTCCGGTGATCATCATTGGCGGTATTCGCTTCGGCGTTTTCACCCCGACCGAAGCG
GCGGTTGTGGCGGCAGTTTACGCCATTTTTGTTTCAACTTTGGTTTATCGTGAACTCAACTTGAAAGCCTTGTTCCATGT
GCTGGTCAGTGCAGGGCGGGCGACGGCGATGGTGATGTTCCTTGTGGGGTGCGCCATGGTTGCGGCTTGGCTGATCACGA
TCGCACAGTTGCCCCAACAGCTTGCCGCGATGCTCGGCCCGCTGGTCGATCATCCCCGGCTGTTGATGGCCGTGATCATG
CTGATCGTGCTGGCCGTGGGCATGGTGATGGATCTGGCCCCGACGGTTCTGATCCTGGTCCCCTTGCTGATGCCGGTGGT
CAAGCTGGCGGGGATCGACCCGGTCTACTTCGGCCTCATGTTCGTCATCAACACCTCGATCGGTCTGATCACACCGCCCG
TGGGGAATGTACTGAATGTCGTGTGTGGCGTGGGGCGGGTGCCGATGTCTGCTGCCGTCAGGGGCGTCGCGCCCTTCATT
CTCGCCTATCTCGCGCTGCTCGCTCTCTTTGTCGTTTTTCCAAACATCATCATCACCCCGATGAAATTCATCATCGGATA
A

Protein sequence : 
MTLALFLGVLLVSIFLGLPVAFALLLASIALMFQLDTFSTDILAQSLINGVDSFPLLAIPFFLVAGEVMSAGGLSQRIVR
LATSLVGHRRGGLGYVAIFTSILLAGLSGSAVADAAALVSILYPMMKKAGYPEGHSMGLLASGGIIAPVIPPSLPLILIG
VAGGISIKSLFLGGIVPGLLMGLTLVLVWGVLMRKEDLEVAPRATAGERLRAVREGFWALLLPVIIIGGIRFGVFTPTEA
AVVAAVYAIFVSTLVYRELNLKALFHVLVSAGRATAMVMFLVGCAMVAAWLITIAQLPQQLAAMLGPLVDHPRLLMAVIM
LIVLAVGMVMDLAPTVLILVPLLMPVVKLAGIDPVYFGLMFVINTSIGLITPPVGNVLNVVCGVGRVPMSAAVRGVAPFI
LAYLALLALFVVFPNIIITPMKFIIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 5e-39 41
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 5e-39 41
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 3e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPOA0250 YP_165079.1 TRAP dicarboxylate transporter, DctM subunit VFG1110 Protein 2e-39 41