Gene Information

Name : ZMO1644 (ZMO1644)
Accession : YP_163379.1
Strain : Zymomonas mobilis ZM4
Genome accession: NC_006526
Putative virulence/resistance : Resistance
Product : DEAD/DEAH box helicase domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1686462 - 1688540 bp
Length : 2079 bp
Strand : -
Note : KEGG: swi:Swit_1516 DEAD/DEAH box helicase domain-containing protein; PFAM: helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases

DNA sequence :
ATGCGTCCAGATATTCTTAATCCGCTGTTTGCCGAAACAGAATCCTTGAAAGGGGTTGGTTCGGCCTTACTCAAACCTTT
AAAAAAGCGTCAGCTGACGCGCCTCAAGGATTTGCTTTTTTATCTGCCCAGTGGACAGATGCGGCGCGTTAAATCAGATC
ATATCAATGCCAAAGATGTCGGTGCCACGGTTATTCTGACCCTGACAGCCAAAGAGTATCGCCATCCTTCCGGTCGCGGG
CCTTTCCGTATTTTAGCCGAAGACCCCTTTGGTGGTCAGATTCAGCTTTTATGGTTTGGTAATCACAGCAGTTGGGCAAG
AAAACTGATGCCCATCGGAGAAACCCGTTTAGTCTCTGGCAAGCTCGATATCTATCAAGAGCAATTACAAATTGTCCACC
CTTCGGAAATCGTGCCGTTAAGCGAAGAAAACAGCATCCCGCTCGAAGAAACCCTTTATCCTCTATCGGATGGCCTGACG
CATCGCCGTATTGGGCAGCTTGTCCGGCAGGCATGGGAAAAATCACCGGATTTACCCGAATGGATTGAACCGAGCCTACT
CAAAAAACATCAATGGCCTTCATGGCGAGAGGCGGTTGAAAGGATACATCAGCATCCCGATGATCGGGCGGCTAAATTAA
GAATTGGCTATGACGAAATTTTTGCCAATCAGTTGGCTTTAAAACTTATTCGTGCGGCTAACCGGCGGAAACGGGGCTTC
CCGTTAAAGGGAGATGGTCATTTACGGGATGCGCTAAATTTGCCTTTTCAGCCAACGGGCGCACAAAGACGTTCCCTTGC
CGAAATCGAAGGCGATATGCAGCAAGCCTCTCCGATGCTGCGATTGTTACAAGGCGATGTCGGATCGGGTAAAACATGGG
TCGCTTTGCATAGCCTACTGATCGCCGCCGAAGCGGGGTATCAGGGGGCATTACTTGCCCCAACAGAAATTCTTGCCCGT
CAGCATTTTGAGACTTTAAGCCAACAGCTTGCCGGATTGCCGGTGAATATCGCCCTTTTGACGGGGCGAGATAAAGGCAA
ATTGCGGGAATCCACCTTAATGGGATTGGCAGACGGCTCTATTCATCTTCTGGTTGGTACCCATGCCATTTTTCAGGAAA
AGGTTAACTACAAAAATTTGGGTCTCGCTATTATTGATGAACAGCATCGCTTCGGGGTCGCCCAACGGATGATGCTGGCT
GAAAAGGCCATTCATACCCCGCATTTATTGGTTATGACAGCAACGCCTATTCCACGCAGCCTGATGCTGACGGCGCATGG
TGAAATGGATGTTAGCCGCCTTGATGAAATGCCCCCCGGTCGTCAGCCGGTCGAAACAAGGGTGATTTCCAGCCGAAAAA
TTCCTGAAATAATCGCCTCTCTTGGCCGCCATATCGCCGAAGGGGGACAATCCTATTGGGTCTGTCCGGCCGTCGGTGAA
GCCGATATTGAAGAAGATTTTTCTCCAAATGCAATCGCTGCGGCTGAACAACGCTTTTCTTTGCTTCAACAGCATTTTGG
GAAAAAAGTCGGGCTAGTGCATGGCAAGATGAAACCCGCTGAAAAAGACAAGGTTATGGATGACTTTGCTGCGGGTAAAA
TTGCGGTTCTGGTCGCGACAACCGTGATTGAAGTCGGGGTTAATGTCCCCAATGCGACCTTGATGATTATCGATCAGGCC
GAACGTTTCGGCTTGGCACAGCTCCATCAATTAAGGGGGCGCGTGGGGCGTGGCGGCGGTCGTTCAATTTGTCTGCTTTT
ACGGAGCGAAGAACTCACTTCGGTGGCAAGGGAACGTTTGGCTCTTATCCGTGAATGTAACGATGGTTTTCGGCTGGCCG
AAGAAGATTTACGATTGCGGGGAAGTGGTGAAATCTTGGGAACCAAGCAATCAGGTGAATCTCATTTCCAGATTGCTTCT
CCTGAAGACCTCTCTGAATTGCTGCCGATAGCGAATGATGATGCCCGATTATTGGTTGATCGTGACGGCGGATTGTCGGG
TGAAAGGGGGCAGGCTGCGCGAATAGCTCTTTATCTTTTTGAACGCGATGCTGGTGTCAGTTTCCTGCGGTCGGGCTGA

Protein sequence :
MRPDILNPLFAETESLKGVGSALLKPLKKRQLTRLKDLLFYLPSGQMRRVKSDHINAKDVGATVILTLTAKEYRHPSGRG
PFRILAEDPFGGQIQLLWFGNHSSWARKLMPIGETRLVSGKLDIYQEQLQIVHPSEIVPLSEENSIPLEETLYPLSDGLT
HRRIGQLVRQAWEKSPDLPEWIEPSLLKKHQWPSWREAVERIHQHPDDRAAKLRIGYDEIFANQLALKLIRAANRRKRGF
PLKGDGHLRDALNLPFQPTGAQRRSLAEIEGDMQQASPMLRLLQGDVGSGKTWVALHSLLIAAEAGYQGALLAPTEILAR
QHFETLSQQLAGLPVNIALLTGRDKGKLRESTLMGLADGSIHLLVGTHAIFQEKVNYKNLGLAIIDEQHRFGVAQRMMLA
EKAIHTPHLLVMTATPIPRSLMLTAHGEMDVSRLDEMPPGRQPVETRVISSRKIPEIIASLGRHIAEGGQSYWVCPAVGE
ADIEEDFSPNAIAAAEQRFSLLQQHFGKKVGLVHGKMKPAEKDKVMDDFAAGKIAVLVATTVIEVGVNVPNATLMIIDQA
ERFGLAQLHQLRGRVGRGGGRSICLLLRSEELTSVARERLALIRECNDGFRLAEEDLRLRGSGEILGTKQSGESHFQIAS
PEDLSELLPIANDDARLLVDRDGGLSGERGQAARIALYLFERDAGVSFLRSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-136 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ZMO1644 YP_163379.1 DEAD/DEAH box helicase domain-containing protein BAC0356 Protein 9e-101 42