Gene Information

Name : rph (ZMO0014)
Accession : YP_161749.1
Strain : Zymomonas mobilis ZM4
Genome accession: NC_006526
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 16367 - 17080 bp
Length : 714 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTCCTTCAGGTCGAACGCCGGATCAATTACGCTCACTTTCCATCGAAACCGGCTTTACCCGCCATGCCGAAGGCTC
CTGCCTGATCAGCTTTGGCGACACCCGCGTTTTGGTCACGGCTTCACTGGAAGAACGCCTGCCTTCATGGTTACGCGGTA
AAGGCCAAGGCTGGGTCACGGCAGAATATGGGATGTTACCCCGTTCTACCCACAGCCGCACCAATCGCGAAGCGGCTCGC
GGCAAACAGTCAGGCCGGACGCAGGAAATCCAGCGTTTGATCGGTCGCTCTTTGCGCGCCGGTATTGACCTCAAAAAATT
GGGTGAAAGACAGATCACCATCGATTGCGATGTGTTGCAGGCCGATGGCGGCACCCGCACCGCTTCGATTTCCGGCGGCT
GGGTAGCCCTTCGCCTCGCCGTCAATAAATTACTGGCATCCGGCCAACTGACCGAAGACCCAATCATTTCTCAAGTGGCC
GCCGTCTCCTGCGGTATTTCGCAAGGGGTGCCGGTGCTTGATCTTGACTATGCCGAGGATTCAACCGCCGAAGCTGATGC
CAATTTCGTGATGATGGGCGATAGCCGTCTGATCGAAGTTCAGGCCAGCGCCGAGGGCGCACCTTATGATGAAGAAGGTC
TGTTGCGTCTGTTGCGTCTGGCGCGCATGGGCTGCCAACAAATCTTCGCAGAACAGAAGAAAGCGGTCGCTTAA

Protein sequence :
MRPSGRTPDQLRSLSIETGFTRHAEGSCLISFGDTRVLVTASLEERLPSWLRGKGQGWVTAEYGMLPRSTHSRTNREAAR
GKQSGRTQEIQRLIGRSLRAGIDLKKLGERQITIDCDVLQADGGTRTASISGGWVALRLAVNKLLASGQLTEDPIISQVA
AVSCGISQGVPVLDLDYAEDSTAEADANFVMMGDSRLIEVQASAEGAPYDEEGLLRLLRLARMGCQQIFAEQKKAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 6e-49 54