|
Name : serS (ebA7034) Accession : YP_161017.1 Strain : Aromatoleum aromaticum EbN1 Genome accession: NC_006513 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 4155951 - 4157234 bp Length : 1284 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATATCCAGCTTCTACGCACCCAGATCGACGCCGTTGCGGCAGCGCTTGCCGCGCGGGGGGCAAATTTCGACGC CGCCGCGTTCCAGTCCATGGAGAATGAGCGCAAGACCCTGCAGACGCGCACCCAGGACCTGCAGGCGCGCCGCAACACGC TGTCGAAGCAGATCGGCGTCCTGAAGAGCAGAGGAGAGGACGCTTCGGCGGCGATGGCCGAAGTCGGGGGCATCGGCGAC GAGCTGAAGGCGAACGAACAGGCGCTGGCGACGCTCCTCGAGCGGATCAATGCGTTCGTCGCCGGCCTGCCGAACCTGCC GCACGACAGTGTTCCTCCGGGCCGTGACGAGTCGGCGAACGTCGAGATCGCCCGCTGGGGCACGCCGCGGGAATTCGACT TCGAGGTCAGCGATCACGTCGATATCGGAAGCGGGCTCGGAGGACTCGATTTCGAAACTGCGGCGAAGATCTCGGGCTCG CGTTTCGCACTGATGCGCGACGGCCTCGCGCGGCTGCATCGCGCGCTCGCCCAGTTCATGCTCGACGTGCATACCCGCGA ACATGGCTACACCGAGGTCCACGTCCCCTATCTCGTCAACCCCGACAGCATGTTCGGCACCGGCCAGCTGCCGAAGTTCG AGGCCGAGCTGTTTTCCGTCATGAAGGACGACGGGCGTTTCTACCTGATCCCGACCGCGGAAGTCCCGATCACGAACATC GTGCGCAACGAGCTGCTCGCGCACGATGTGCTGCCGCTGAAGTTCGTCGGCCACACGCCGTGCTTCCGTTCCGAAGCAGG CAGTTACGGTCGTGACACGCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTGGAACTGGTGCGGATCGAACATCCGG ATGCGTCATGGGCGGCGCTCGAGGAACTGACCGGTCACGCCGAGGCGATCCTCCGCAAGCTCGAGTTGCCGTATCGCAAA GTCGTGCTGTGCACCGGCGACATGGGGTTTTCCGCCGCCAAGACCTACGACCTCGAAGTGTGGCTGCCGGCGCAGAAAAC TTACCGCGAAATTTCGTCGTGCTCATGCACCGGGGCCTTTCAGGCGCGCCGCATGCAGGCGCGGTTCCGCAACACGCAGG GCAAGAACGAACTGGTGCACACCCTGAACGGTTCGGGCCTGGCAGTCGGCAGGACGCTCGTCGCCGTGCTCGAGAACTAC CAGCAGGCCGACGGCTCGGTCGTCGTGCCGAAGGTCCTGGTGCCGTGGATGGGCGGGATCGAGGTGCTCGAACCCCGCGG CTGA Protein sequence : MLDIQLLRTQIDAVAAALAARGANFDAAAFQSMENERKTLQTRTQDLQARRNTLSKQIGVLKSRGEDASAAMAEVGGIGD ELKANEQALATLLERINAFVAGLPNLPHDSVPPGRDESANVEIARWGTPREFDFEVSDHVDIGSGLGGLDFETAAKISGS RFALMRDGLARLHRALAQFMLDVHTREHGYTEVHVPYLVNPDSMFGTGQLPKFEAELFSVMKDDGRFYLIPTAEVPITNI VRNELLAHDVLPLKFVGHTPCFRSEAGSYGRDTRGMIRQHQFDKVELVRIEHPDASWAALEELTGHAEAILRKLELPYRK VVLCTGDMGFSAAKTYDLEVWLPAQKTYREISSCSCTGAFQARRMQARFRNTQGKNELVHTLNGSGLAVGRTLVAVLENY QQADGSVVVPKVLVPWMGGIEVLEPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-95 | 53 |
