|
Name : mutS (ebA6453) Accession : YP_160716.1 Strain : Aromatoleum aromaticum EbN1 Genome accession: NC_006513 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 3826768 - 3829407 bp Length : 2640 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGGAATGAGTGAAATAGCGAAAGCAGCACAGAAAGATAAAGCAATCGGCGGAGCCGATAGGGACAGTCACACTCCCAT GATGCAGCAGTATCTCCGCATCAAGGCGCAGCATCCTGACACATTGCTGTTCTACCGCATGGGGGACTTCTACGAGCTGT TCTTCGATGACGCGGAGAAAGCCGCGCGGCTGCTCGACATCACGCTGACGACACGCGGGCAGTCGGCCGGCACGCCGATC CGCATGGCCGGAGTGCCTTTCCACGCGGTCGAACAATACTTGGCGCGGCTCGTCAAGCTCGGCGAATCGGTCGTGATCGC CGAGCAGGTCGGCGAGCCGGGAGCGACCAAGGGGCCGATGGAGCGCGCGGTGAGCCGCATCGTGACGCCGGGCACTTTGA CCGACGCGGCGCTGCTGGACGATCGCATCGACTCGCTGCTGCTCGCGGCCACCCTGCACCGCGGCGTGCTCGGGCTCGCG TGGCTCAATCTCGCCAATGGCGACCTGCGGGTGATGGAATGCCCGGCCGAGCAGTTGCAGGCGCAGTTCGAACGGCTGCG CCCCGCCGAAGTGCTGGTGCCGGACGGGCTGGCGCTGCCGCTGGTCGAATCGCTGTCGCCGGTGCTGCGCCGGCTTGCCG ACTGGCAGTTCGACGCGGGCAACGGTGAACGCCTGCTGACCGCTCATTTCGGCACTCGTGACCTGGCCGGCTTCGACGCC GAAGGCCTGCCGGTTGCACTCGCCGCCGCAGCCGCGCTGTTCGAGTACGCGCGCAGCACGCAGCGCCAGAGCCTCGAGCA CGTCACCGGACTGCGCGTCGAGCGCGAAGCCGAATACCTGCGCCTCGATGCGGCGACACGGCGCAACCTGGAACTGACCG AGACTCTGCGCGGAGAAGCGTCGCCGACGCTGTTTTCGCTGCTCGATTCATGCATCACCAGCATGGGCTCGCGCTGGCTG CGGCATGCGCTGCATCACCCGCTGCGCGACCGCGGAGTCGCCGCGCAACGCCACGGGGCGGTCGGGGAACTCGCCGGATC GGACGCCGGCGCCCCCGCGGATATCGGGGACGCGCGAATGCTCGGCGCCGTCCGCGCTGCGCTGCGCGGAGTCGCCGACG TCGATCGCATCACTGCGCGGATTGCGCTGCGCAGTGCGAGGCCGCGCGATCTGGCGGCGCTGAGCGACAGTCTCGCGCGA CTGCCGCAACTGCATGCCGCGTTGGGCACCCCGCAGGCTCCGCTGCTTTGCGACCTGCTCGCCGCGATCGCGGTGCCGGA CAATGCGCTCGATCTCCTCGTGCGCGCCGTCGCCGCCGAGCCGGCCGCCGCAGTGCGCGACGGCGGCGTGATCGCTCCCG GGTTCGACGCGGAGCTCGACGAGCTGCGCGGCATCCAGTCGAACTGCGGCGAATTCCTGCTGGCCCTCGAAGTGCGCGAA CGCGAACGCAGCGGCATCGCGACCCTCAAGGTCGAATTCAACAAGGTGCATGGTTTCTACATCGAGGTGAGCCACGCGAA CACTGGCAAAGTGCCCGACGACTACCGCCGCCGCCAGACGCTGAAGAACGCCGAGCGCTACATCACGCCGGAACTGAAGG CGTTCGAGGACAAGGCGCTGTCGGCCCAGGAGCGCGCGCTTGCCCGTGAGAAGCTACTCTATGAAGCGCTGCTCGAAGCG CTCGCCGCGCATATCCCGGCGTTGCAGCGCATCGCCCGCGCGCTCGCGTGCCTCGACGGTCTGGGCGCGTTCGCCGAAGC TGCCGTGCGCCACAGCTACGTCTGCCCGCAGTTTTCCGCGCAGCCGGGCGTCGACATCATCGGCGGCCGCCATCCGGTCG TCGAGCGACAGGTCGAAGACTTCATTTCCAACAATTGCCGCCTCGCACCGACGCGCCGCATGCTGCTGATCACCGGACCG AACATGGGCGGCAAATCGACGTTCATGCGCCAGGTCGCGCTGATCGCCCTGCTCGCTCACGTCGGCGCGTTCGTGCCGGC GCGAAGCGCCCGCCTCGGCCCGCTCGACGCGATCTTCACCCGCATCGGCGCATCCGACGATCTCGCCTCAGGCCGCTCCA CGTTCATGGTCGAGATGACTGAGGCGTCGGCGATCCTGCACGGCGCGACCGAACAGAGCCTCGTGCTGATGGACGAGATC GGCCGCGGCACTTCGACTTTCGACGGGCTCGCGCTGGCATTCGCAATCGCCCGTCACCTGCTCGAGAAAAACCGCTGCCT GACGCTGTTCGCGACGCATTACTTCGAGCTCACCCGCCTCAACGGCGACTACCCGGAATGCGCGAACGTGCACCTCGACG CCGTCGAACACGCGCACCGCATCGTGTTCCTGCACGCGGTCGAGGACGGGCCCGCAAGCCAGAGCTACGGCATTGAAGTC GCGGCGCTCGCCGGCATTCCGGGCTCGGTTGTGCGCGAGGCGAAACGGCGCCTGCGCGCACTCGAGAACCGCGAAGTCGG CAATGGGCCGCAGGCGGACCTCTTTGCCGCGCTGCCGGATCGTGAACCCGCGACGCCGTCGCACCCGGCGCTCACCGCGC TGGCCGAACTTGACCCCGACACACTGAGCCCGCGCGAGGCGCTCGAACGCCTGTATGCGCTGAAACGGATGACCGCATGA Protein sequence : MGMSEIAKAAQKDKAIGGADRDSHTPMMQQYLRIKAQHPDTLLFYRMGDFYELFFDDAEKAARLLDITLTTRGQSAGTPI RMAGVPFHAVEQYLARLVKLGESVVIAEQVGEPGATKGPMERAVSRIVTPGTLTDAALLDDRIDSLLLAATLHRGVLGLA WLNLANGDLRVMECPAEQLQAQFERLRPAEVLVPDGLALPLVESLSPVLRRLADWQFDAGNGERLLTAHFGTRDLAGFDA EGLPVALAAAAALFEYARSTQRQSLEHVTGLRVEREAEYLRLDAATRRNLELTETLRGEASPTLFSLLDSCITSMGSRWL RHALHHPLRDRGVAAQRHGAVGELAGSDAGAPADIGDARMLGAVRAALRGVADVDRITARIALRSARPRDLAALSDSLAR LPQLHAALGTPQAPLLCDLLAAIAVPDNALDLLVRAVAAEPAAAVRDGGVIAPGFDAELDELRGIQSNCGEFLLALEVRE RERSGIATLKVEFNKVHGFYIEVSHANTGKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERALAREKLLYEALLEA LAAHIPALQRIARALACLDGLGAFAEAAVRHSYVCPQFSAQPGVDIIGGRHPVVERQVEDFISNNCRLAPTRRMLLITGP NMGGKSTFMRQVALIALLAHVGAFVPARSARLGPLDAIFTRIGASDDLASGRSTFMVEMTEASAILHGATEQSLVLMDEI GRGTSTFDGLALAFAIARHLLEKNRCLTLFATHYFELTRLNGDYPECANVHLDAVEHAHRIVFLHAVEDGPASQSYGIEV AALAGIPGSVVREAKRRLRALENREVGNGPQADLFAALPDREPATPSHPALTALAELDPDTLSPREALERLYALKRMTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 3e-178 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_160716.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 51 |
