Gene Information

Name : ebA6235 (ebA6235)
Accession : YP_160590.1
Strain : Aromatoleum aromaticum EbN1
Genome accession: NC_006513
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3692926 - 3693585 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
ATGCGGGTTCTGCTGGTGGAAGACGATGCGAGCCTCGGCGAAGGGATTCTCACGTCGCTCAAGCCCGAAGGCTACACGGT
CGACTGGGTGCGGGACGGCAGCAGCGCGCTGCACGCCCTGACCCACGAGAGTTTCGGGCTGGCAGTGCTGGATCTCGGCC
TGCCCCGGCTCGACGGGCTCGAAGTGCTGCGCCAGTTGCGGGCCGCCGAGAATCCGACACCAGTGCTGGTGCTGACCGCG
CGCGACACCATCGCCGATCGCATCGCCGGGCTCGATGCCGGCGCAGACGACTATCTCGTCAAGCCTTTCGACGTCGCCGA
GCTCAAGGCCAGGCTGCGGGCGCTGCTGCGACGCAGCTTCAATCGTCCGCAGCCGGCGCTCGAATATCGCGGCATCACGC
TCGACCCCGCCAGCCAGTTGGTGACGTGGAACGGCCAGACCGTAAGCCTGCAGCGCAAGGAATTCATCCTGCTCCACGAA
CTGATCGCGCAACCCGGCCGCGTGCTGACGCGCGACAAGCTGCAGCAGGTGCTCTACGGCTGGGGCGAGGAAGCCGAGAG
CAACGCGCTCGAGGTGCACATCCATCACCTGCGGAAGAAATTCTTCCCCGAACTGATCCGTACCGTGCGCGGCGTCGGCT
ATCTCGTCGACAAGGGCTGA

Protein sequence : 
MRVLLVEDDASLGEGILTSLKPEGYTVDWVRDGSSALHALTHESFGLAVLDLGLPRLDGLEVLRQLRAAENPTPVLVLTA
RDTIADRIAGLDAGADDYLVKPFDVAELKARLRALLRRSFNRPQPALEYRGITLDPASQLVTWNGQTVSLQRKEFILLHE
LIAQPGRVLTRDKLQQVLYGWGEEAESNALEVHIHHLRKKFFPELIRTVRGVGYLVDKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-34 49
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ebA6235 YP_160590.1 DNA-binding response regulator BAC0487 Protein 5e-34 46
ebA6235 YP_160590.1 DNA-binding response regulator BAC0288 Protein 3e-25 42
ebA6235 YP_160590.1 DNA-binding response regulator BAC0197 Protein 3e-29 42
ebA6235 YP_160590.1 DNA-binding response regulator NC_002516.2.879194.p Protein 8e-25 41
ebA6235 YP_160590.1 DNA-binding response regulator AE000516.2.gene3505. Protein 3e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ebA6235 YP_160590.1 DNA-binding response regulator VFG0473 Protein 1e-36 47
ebA6235 YP_160590.1 DNA-binding response regulator VFG1390 Protein 5e-35 46
ebA6235 YP_160590.1 DNA-binding response regulator VFG0596 Protein 1e-31 41