Gene Information

Name : int (ebA5534)
Accession : YP_160175.1
Strain : Aromatoleum aromaticum EbN1
Genome accession: NC_006513
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 3293483 - 3294691 bp
Length : 1209 bp
Strand : -
Note : -

DNA sequence : 
ATGCAACTAACTGATAAAGCAATCCGTGGCGTCAAGGGCGGCGCAAAGCCGGTCAAGATGGCGGACGGGGGCGGATTGTA
CCTTGAAGTCACACCGGCCGGGGGCAAGCTCTGGCGCTACCGCTTCCGCCTTGCGGGCAAGGAGAACGTGTTCGCGATTG
GCGCATACCCGCGGGTAAGTCTCGCCGATGCTCGCAAGGCACGGGACGAAGCCCGCGACCTCGTCAAGCAGGGGTTCAAC
CCGAGCCACTACCGGCAGCAGGCAAAGCAAGCCGTTATCGACGAGAACCTGAACACCTTCGCTCCCGTCGCTGACGAATG
GTATCAGTCCAAGGTCGATTCCTGGTCGAAGGGACACAGGCACCACGTCCGCACAATCCTCGACAAAGACATTTTGCCGC
GCATCGGAAAGCTGCCGATCCGGTCGATCACATCGCCGCTTCTGCATGATGTGATGAAGAAGATTGTGGCCCGTGGGGCA
ACTACCCGTGCAATCCTCGCGCGCCAGATCATGGGCTCCGTGTTCAACCTTGCGATCCTGACGCACCGCGCGGACACGAA
CCCTGCCGAACCGCTGAAGCGCCAGATCGCCCGCTGCGTCACTGAGCACCATCGCCATCTTGAGGAGCGCGATGTGGGCG
ACTTCCTGCGCAAGCTGTCCGACTACACCGGGCACGCAACGACGCGGATTGCGCTGCAACTGCTGATGCTCACGGCCGTT
CGACCGGGCGAGGTTTGCGGCGCACGATGGGCCGAGTTCGATATCGACGGGCAGAACTGGACGATTCCGAAAGAACGCAT
GAAGACACGGAAGCCCCATATCGTTCCGCTGTCGAACCAAGCGGTCGACCTCCTGAAGGAACTCGAACCGATCACCGGGG
ACACGGCATTCCTGTTCCCGAGCCAAGGTACGAAGACGCAGACGATGCCGACCCAGTCCATTAGGAACGCCGTGGTCAAG
CTCGGATACGCCGACAAGTTCAGCCCACACGGAGCACGCGGAACGTTCAGCACGATGCTGAACGGACGGGGCTACAACTC
CGACTGGATCGAGCGACAGCTCGCGCACGACGAAGGAAATCGCGTTCGAGCGTCGTACAACCACATGCAGTACCTGCCCG
AGCGACGCAAGATGCTGCAGGAATGGGCCGACCTGCTGGACGAGTTGCGAACGGGCGCAAAAGTCTTGCCATTCCAACGC
AGCGCGTAA

Protein sequence : 
MQLTDKAIRGVKGGAKPVKMADGGGLYLEVTPAGGKLWRYRFRLAGKENVFAIGAYPRVSLADARKARDEARDLVKQGFN
PSHYRQQAKQAVIDENLNTFAPVADEWYQSKVDSWSKGHRHHVRTILDKDILPRIGKLPIRSITSPLLHDVMKKIVARGA
TTRAILARQIMGSVFNLAILTHRADTNPAEPLKRQIARCVTEHHRHLEERDVGDFLRKLSDYTGHATTRIALQLLMLTAV
RPGEVCGARWAEFDIDGQNWTIPKERMKTRKPHIVPLSNQAVDLLKELEPITGDTAFLFPSQGTKTQTMPTQSIRNAVVK
LGYADKFSPHGARGTFSTMLNGRGYNSDWIERQLAHDEGNRVRASYNHMQYLPERRKMLQEWADLLDELRTGAKVLPFQR
SA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 3e-67 43
int AAD44730.1 Int Not tested SHI-2 Protein 1e-68 43
int CAC39282.1 integrase Not tested LPA Protein 6e-69 43
aec33 AAW51716.1 Int Not tested AGI-3 Protein 4e-69 43
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-68 43
int ACU09430.1 integrase Not tested LEE Protein 2e-68 43
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 2e-68 43
ECs4534 NP_312561.1 integrase Not tested LEE Protein 2e-68 43
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 4e-67 42
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 4e-67 42
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 3e-67 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
int YP_160175.1 integrase VFG0783 Protein 9e-69 43
int YP_160175.1 integrase VFG0598 Protein 2e-67 42