Gene Information

Name : istB (ebA5526)
Accession : YP_160170.1
Strain : Aromatoleum aromaticum EbN1
Genome accession: NC_006513
Putative virulence/resistance : Unknown
Product : transposition helper protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 3290792 - 3291130 bp
Length : 339 bp
Strand : -
Note : -

DNA sequence :
ATGATTGCGCCGGAGCAGATCTGGCTCGCGGTCGAGCCGATCGACATGCGTCTGGGCATCGACGGCCTGTCGGCACGGCT
GCAGAACAGCCTGGGCCGCGCGCCGTGCGATGGCAGTGCGTACGCCTTCATCAACCGGGCCCGCACGCGCGTGAAGGTGC
TGCGGTGGGATGGCACCGGAGTGTGGCTGAGTCAGCGGCGTCTGCATCGGGGCAGCTTCAGCTGGCCCGCTGCCGACACG
GCGGTGTTCGCGCTGTCGGCCGAGCAGTGGCAGTGGCTCGTGGCGGGGGTCGAGTGGCAGCGCCTGAGTGCCGCCGCACC
GGCTCACTGGCGGGTGTGA

Protein sequence :
MIAPEQIWLAVEPIDMRLGIDGLSARLQNSLGRAPCDGSAYAFINRARTRVKVLRWDGTGVWLSQRRLHRGSFSWPAADT
AVFALSAEQWQWLVAGVEWQRLSAAAPAHWRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1602 NP_287106.1 hypothetical protein Not tested TAI Protein 3e-23 50
Z1163 NP_286698.1 hypothetical protein Not tested TAI Protein 3e-23 50
unnamed ABR13518.1 transposase Not tested PAGI-7 Protein 1e-16 45
EXB18 ABD94704.1 ISPpu14 transposase Orf2 Not tested ExoU island B Protein 3e-16 45
RL060 AAP84185.1 transposase Not tested PAPI-1 Protein 8e-16 44
tnpB AEZ06052.1 transposition helper protein Not tested Tn6167 Protein 2e-14 41