Gene Information

Name : ebA527 (ebA527)
Accession : YP_157293.1
Strain : Aromatoleum aromaticum EbN1
Genome accession: NC_006513
Putative virulence/resistance : Virulence
Product : RadC family DNA repair protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 303429 - 304019 bp
Length : 591 bp
Strand : +
Note : -

DNA sequence : 
ATGTTGCCCTTCTACGCTTCGCCTACTTCGCTCGCGGATGCCGCCCTGCTCGAGCGTTTCTTCGGCCCCGAGGCCGAGGA
CGTCTGGGAAAGCTGCGGCGGCTCGTGGAGCCGGGTCGTCGAGTTCGCCCGCGAGCCCCGCACGCCAGCTTGGGACGCAT
TGTCCAGCGCGCTCGAAATTCTGCAGCGCAGTTTTGCCGAGCAGCTTGCCGCGGGGGACGTTCTCGACGCCCCCGATGTG
GTCAAGCCGTTCCTTCGAACTTTCTTCGCGGGGCGACCCTACGAAGTTTTCGTGGCCCTCTATCTCAACGCCCGCAACCA
CCTCATCCTCGCCGAAGAGGCTTTTCGCGGCACGCTGACGCAAACGAGCGTCTATCCGCGCGAGATCGTGCGCCGGGCGC
TCGAGCTTCGCGCGGCCGGCGTGATCTTTTCGCACCAGCATCCGTCCGGCGCCTGCGAGCCGTCGCTCGCGGACGAACTG
CTCACGCGAACGCTCACTTCTGCGCTCGCGATGGTCGAGGTGCGGGTGCTCGACCACTTCGTCGTTGCCGGGCACTCGAC
GGTCTCGTTCGCCGAGCGGGGTCTTCTCTAG

Protein sequence : 
MLPFYASPTSLADAALLERFFGPEAEDVWESCGGSWSRVVEFAREPRTPAWDALSSALEILQRSFAEQLAAGDVLDAPDV
VKPFLRTFFAGRPYEVFVALYLNARNHLILAEEAFRGTLTQTSVYPREIVRRALELRAAGVIFSHQHPSGACEPSLADEL
LTRTLTSALAMVEVRVLDHFVVAGHSTVSFAERGLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 2e-23 47
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 2e-23 47
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 1e-23 47
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 4e-24 44
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 1e-26 43
radC AAN62275.1 putative DNA repair protein RadC Not tested PAGI-3(SG) Protein 2e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ebA527 YP_157293.1 RadC family DNA repair protein VFG1119 Protein 5e-24 47